Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ShdO88834 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.27■■□□□ 1
ShdO88834 Gm15820-201ENSMUST00000201566 728 ntBASIC21.27■■□□□ 1
ShdO88834 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.27■■□□□ 1
ShdO88834 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ShdO88834 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.27■■□□□ 1
ShdO88834 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
ShdO88834 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.27■□□□□ 0.99
ShdO88834 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ShdO88834 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ShdO88834 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ShdO88834 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.26■□□□□ 0.99
ShdO88834 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.26■□□□□ 0.99
ShdO88834 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ShdO88834 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ShdO88834 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ShdO88834 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
ShdO88834 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ShdO88834 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ShdO88834 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.25■□□□□ 0.99
ShdO88834 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ShdO88834 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ShdO88834 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ShdO88834 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
ShdO88834 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ShdO88834 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.24■□□□□ 0.99
ShdO88834 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
ShdO88834 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ShdO88834 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ShdO88834 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ShdO88834 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
ShdO88834 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ShdO88834 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ShdO88834 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
ShdO88834 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ShdO88834 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ShdO88834 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ShdO88834 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShdO88834 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.22■□□□□ 0.99
ShdO88834 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShdO88834 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.22■□□□□ 0.99
ShdO88834 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShdO88834 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShdO88834 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShdO88834 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShdO88834 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShdO88834 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
ShdO88834 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShdO88834 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ShdO88834 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
ShdO88834 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ShdO88834 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ShdO88834 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ShdO88834 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ShdO88834 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.2■□□□□ 0.98
ShdO88834 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.2■□□□□ 0.98
ShdO88834 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ShdO88834 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ShdO88834 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ShdO88834 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ShdO88834 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ShdO88834 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ShdO88834 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShdO88834 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
ShdO88834 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShdO88834 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ShdO88834 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShdO88834 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShdO88834 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShdO88834 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShdO88834 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShdO88834 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShdO88834 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ShdO88834 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ShdO88834 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ShdO88834 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ShdO88834 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ShdO88834 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.18■□□□□ 0.98
ShdO88834 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShdO88834 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShdO88834 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShdO88834 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
ShdO88834 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
ShdO88834 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ShdO88834 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ShdO88834 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ShdO88834 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.17■□□□□ 0.98
ShdO88834 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.17■□□□□ 0.98
ShdO88834 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ShdO88834 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ShdO88834 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ShdO88834 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ShdO88834 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShdO88834 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShdO88834 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ShdO88834 Gm10399-202ENSMUST00000202768 748 ntBASIC21.16■□□□□ 0.98
ShdO88834 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShdO88834 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShdO88834 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShdO88834 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms