Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc28a2O88627 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Slc28a2O88627 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Slc28a2O88627 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc28a2O88627 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc28a2O88627 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Slc28a2O88627 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slc28a2O88627 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.37■□□□□ 0.53
Slc28a2O88627 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slc28a2O88627 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc28a2O88627 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc28a2O88627 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc28a2O88627 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc28a2O88627 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc28a2O88627 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Slc28a2O88627 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc28a2O88627 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.36■□□□□ 0.53
Slc28a2O88627 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc28a2O88627 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc28a2O88627 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc28a2O88627 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Slc28a2O88627 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc28a2O88627 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc28a2O88627 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Slc28a2O88627 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc28a2O88627 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc28a2O88627 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc28a2O88627 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.34■□□□□ 0.53
Slc28a2O88627 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Slc28a2O88627 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Slc28a2O88627 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.34■□□□□ 0.53
Slc28a2O88627 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc28a2O88627 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc28a2O88627 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc28a2O88627 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc28a2O88627 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc28a2O88627 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc28a2O88627 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Slc28a2O88627 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.33■□□□□ 0.52
Slc28a2O88627 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Slc28a2O88627 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc28a2O88627 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slc28a2O88627 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.32■□□□□ 0.52
Slc28a2O88627 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc28a2O88627 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc28a2O88627 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.32■□□□□ 0.52
Slc28a2O88627 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc28a2O88627 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc28a2O88627 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.32■□□□□ 0.52
Slc28a2O88627 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc28a2O88627 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc28a2O88627 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc28a2O88627 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc28a2O88627 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc28a2O88627 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc28a2O88627 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Slc28a2O88627 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Slc28a2O88627 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.31■□□□□ 0.52
Slc28a2O88627 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.3■□□□□ 0.52
Slc28a2O88627 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc28a2O88627 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc28a2O88627 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Slc28a2O88627 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc28a2O88627 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Slc28a2O88627 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.3■□□□□ 0.52
Slc28a2O88627 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.3■□□□□ 0.52
Slc28a2O88627 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc28a2O88627 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc28a2O88627 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc28a2O88627 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.29■□□□□ 0.52
Slc28a2O88627 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc28a2O88627 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Slc28a2O88627 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Slc28a2O88627 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slc28a2O88627 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc28a2O88627 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc28a2O88627 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc28a2O88627 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc28a2O88627 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.28■□□□□ 0.52
Slc28a2O88627 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.28■□□□□ 0.52
Slc28a2O88627 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Slc28a2O88627 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc28a2O88627 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slc28a2O88627 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Slc28a2O88627 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc28a2O88627 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.27■□□□□ 0.52
Slc28a2O88627 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc28a2O88627 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc28a2O88627 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc28a2O88627 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Slc28a2O88627 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc28a2O88627 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.27■□□□□ 0.52
Slc28a2O88627 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.27■□□□□ 0.52
Slc28a2O88627 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc28a2O88627 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Slc28a2O88627 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slc28a2O88627 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Slc28a2O88627 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Slc28a2O88627 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slc28a2O88627 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms