Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTP4A3O75365 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTP4A3O75365 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PTP4A3O75365 AC133561.1-201ENST00000568600 2415 ntBASIC20.86■□□□□ 0.93
PTP4A3O75365 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
PTP4A3O75365 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
PTP4A3O75365 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.86■□□□□ 0.93
PTP4A3O75365 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTP4A3O75365 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTP4A3O75365 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.85■□□□□ 0.93
PTP4A3O75365 RARRES2P2-201ENST00000394842 485 ntBASIC20.85■□□□□ 0.93
PTP4A3O75365 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.85■□□□□ 0.93
PTP4A3O75365 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTP4A3O75365 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.85■□□□□ 0.93
PTP4A3O75365 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
PTP4A3O75365 AC012676.1-201ENST00000574705 1949 ntBASIC20.84■□□□□ 0.93
PTP4A3O75365 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.84■□□□□ 0.93
PTP4A3O75365 AC068473.5-201ENST00000616428 2072 ntBASIC20.84■□□□□ 0.93
PTP4A3O75365 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.84■□□□□ 0.93
PTP4A3O75365 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.84■□□□□ 0.93
PTP4A3O75365 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTP4A3O75365 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.84■□□□□ 0.93
PTP4A3O75365 U85056.1-201ENST00000616429 682 ntBASIC20.84■□□□□ 0.93
PTP4A3O75365 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTP4A3O75365 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTP4A3O75365 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTP4A3O75365 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTP4A3O75365 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTP4A3O75365 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTP4A3O75365 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTP4A3O75365 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PTP4A3O75365 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PTP4A3O75365 LONRF2P2-201ENST00000439212 571 ntBASIC20.83■□□□□ 0.93
PTP4A3O75365 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PTP4A3O75365 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.83■□□□□ 0.93
PTP4A3O75365 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.83■□□□□ 0.93
PTP4A3O75365 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTP4A3O75365 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PTP4A3O75365 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PTP4A3O75365 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTP4A3O75365 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.82■□□□□ 0.92
PTP4A3O75365 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PTP4A3O75365 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTP4A3O75365 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTP4A3O75365 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTP4A3O75365 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.81■□□□□ 0.92
PTP4A3O75365 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PTP4A3O75365 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTP4A3O75365 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.81■□□□□ 0.92
PTP4A3O75365 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PTP4A3O75365 AC129492.7-201ENST00000622992 756 ntBASIC20.81■□□□□ 0.92
PTP4A3O75365 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTP4A3O75365 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTP4A3O75365 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTP4A3O75365 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
PTP4A3O75365 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTP4A3O75365 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.8■□□□□ 0.92
PTP4A3O75365 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PTP4A3O75365 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.8■□□□□ 0.92
PTP4A3O75365 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.8■□□□□ 0.92
PTP4A3O75365 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTP4A3O75365 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTP4A3O75365 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTP4A3O75365 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.79■□□□□ 0.92
PTP4A3O75365 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTP4A3O75365 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTP4A3O75365 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTP4A3O75365 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.79■□□□□ 0.92
PTP4A3O75365 HSD17B1P1-201ENST00000590052 955 ntBASIC20.79■□□□□ 0.92
PTP4A3O75365 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTP4A3O75365 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTP4A3O75365 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTP4A3O75365 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTP4A3O75365 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTP4A3O75365 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTP4A3O75365 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTP4A3O75365 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTP4A3O75365 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTP4A3O75365 AL161729.1-201ENST00000604104 1402 ntBASIC20.78■□□□□ 0.92
PTP4A3O75365 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.77■□□□□ 0.92
PTP4A3O75365 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.77■□□□□ 0.92
PTP4A3O75365 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
PTP4A3O75365 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.77■□□□□ 0.92
PTP4A3O75365 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.77■□□□□ 0.92
PTP4A3O75365 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
PTP4A3O75365 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PTP4A3O75365 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTP4A3O75365 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PTP4A3O75365 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PTP4A3O75365 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTP4A3O75365 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PTP4A3O75365 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.76■□□□□ 0.91
PTP4A3O75365 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTP4A3O75365 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.76■□□□□ 0.91
PTP4A3O75365 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTP4A3O75365 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTP4A3O75365 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PTP4A3O75365 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.76■□□□□ 0.91
PTP4A3O75365 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTP4A3O75365 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms