Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tspan6O70401 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tspan6O70401 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.37■□□□□ 0.85
Tspan6O70401 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Tspan6O70401 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tspan6O70401 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tspan6O70401 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tspan6O70401 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.36■□□□□ 0.85
Tspan6O70401 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Tspan6O70401 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.36■□□□□ 0.85
Tspan6O70401 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tspan6O70401 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.35■□□□□ 0.85
Tspan6O70401 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tspan6O70401 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tspan6O70401 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tspan6O70401 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tspan6O70401 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tspan6O70401 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.35■□□□□ 0.85
Tspan6O70401 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.35■□□□□ 0.85
Tspan6O70401 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tspan6O70401 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tspan6O70401 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tspan6O70401 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Tspan6O70401 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tspan6O70401 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.34■□□□□ 0.85
Tspan6O70401 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.34■□□□□ 0.85
Tspan6O70401 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tspan6O70401 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tspan6O70401 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tspan6O70401 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tspan6O70401 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Tspan6O70401 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tspan6O70401 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tspan6O70401 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Tspan6O70401 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tspan6O70401 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tspan6O70401 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tspan6O70401 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
Tspan6O70401 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tspan6O70401 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Tspan6O70401 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.32■□□□□ 0.84
Tspan6O70401 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Tspan6O70401 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tspan6O70401 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tspan6O70401 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tspan6O70401 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tspan6O70401 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tspan6O70401 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tspan6O70401 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tspan6O70401 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tspan6O70401 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tspan6O70401 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Tspan6O70401 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tspan6O70401 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tspan6O70401 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Tspan6O70401 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tspan6O70401 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tspan6O70401 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Tspan6O70401 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tspan6O70401 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Tspan6O70401 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tspan6O70401 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tspan6O70401 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Tspan6O70401 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.29■□□□□ 0.84
Tspan6O70401 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.29■□□□□ 0.84
Tspan6O70401 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Tspan6O70401 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tspan6O70401 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tspan6O70401 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tspan6O70401 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.28■□□□□ 0.84
Tspan6O70401 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tspan6O70401 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Tspan6O70401 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tspan6O70401 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.27■□□□□ 0.84
Tspan6O70401 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.27■□□□□ 0.84
Tspan6O70401 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.27■□□□□ 0.84
Tspan6O70401 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Tspan6O70401 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tspan6O70401 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Tspan6O70401 Gm43137-201ENSMUST00000198052 594 ntBASIC20.26■□□□□ 0.83
Tspan6O70401 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tspan6O70401 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tspan6O70401 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tspan6O70401 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tspan6O70401 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Tspan6O70401 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tspan6O70401 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.25■□□□□ 0.83
Tspan6O70401 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.25■□□□□ 0.83
Tspan6O70401 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Tspan6O70401 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tspan6O70401 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Tspan6O70401 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tspan6O70401 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tspan6O70401 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tspan6O70401 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.24■□□□□ 0.83
Tspan6O70401 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tspan6O70401 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tspan6O70401 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Tspan6O70401 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Tspan6O70401 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 1012.9 ms