Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Gm40881-201ENSMUST00000223397 166 ntBASIC17.96■□□□□ 0.47
Dkk1O54908 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC17.96■□□□□ 0.47
Dkk1O54908 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Dkk1O54908 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Dkk1O54908 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Dkk1O54908 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Dkk1O54908 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Dkk1O54908 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.96■□□□□ 0.47
Dkk1O54908 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Dkk1O54908 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.96■□□□□ 0.47
Dkk1O54908 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Dkk1O54908 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Dkk1O54908 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Dkk1O54908 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.95■□□□□ 0.46
Dkk1O54908 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Dkk1O54908 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Dkk1O54908 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Dkk1O54908 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Dkk1O54908 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.95■□□□□ 0.46
Dkk1O54908 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Dkk1O54908 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Dkk1O54908 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.94■□□□□ 0.46
Dkk1O54908 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Dkk1O54908 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Dkk1O54908 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.94■□□□□ 0.46
Dkk1O54908 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Dkk1O54908 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Dkk1O54908 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Dkk1O54908 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Dkk1O54908 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Dkk1O54908 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Dkk1O54908 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Dkk1O54908 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Dkk1O54908 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Dkk1O54908 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Dkk1O54908 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Dkk1O54908 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Dkk1O54908 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Dkk1O54908 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.92■□□□□ 0.46
Dkk1O54908 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC17.92■□□□□ 0.46
Dkk1O54908 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.92■□□□□ 0.46
Dkk1O54908 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.92■□□□□ 0.46
Dkk1O54908 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.92■□□□□ 0.46
Dkk1O54908 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
Dkk1O54908 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Dkk1O54908 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Dkk1O54908 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Dkk1O54908 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Dkk1O54908 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Dkk1O54908 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Dkk1O54908 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Dkk1O54908 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Dkk1O54908 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.91■□□□□ 0.46
Dkk1O54908 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC17.91■□□□□ 0.46
Dkk1O54908 Gm9959-201ENSMUST00000068277 390 ntBASIC17.91■□□□□ 0.46
Dkk1O54908 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Dkk1O54908 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Dkk1O54908 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Dkk1O54908 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Dkk1O54908 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Dkk1O54908 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Dkk1O54908 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Dkk1O54908 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Dkk1O54908 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.9■□□□□ 0.46
Dkk1O54908 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Dkk1O54908 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Dkk1O54908 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Dkk1O54908 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.9■□□□□ 0.46
Dkk1O54908 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Dkk1O54908 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Dkk1O54908 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Dkk1O54908 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Dkk1O54908 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Dkk1O54908 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Dkk1O54908 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Dkk1O54908 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Dkk1O54908 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Dkk1O54908 Gm45102-201ENSMUST00000207427 857 ntBASIC17.88■□□□□ 0.45
Dkk1O54908 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Dkk1O54908 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.88■□□□□ 0.45
Dkk1O54908 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Dkk1O54908 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Dkk1O54908 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Dkk1O54908 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Dkk1O54908 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Dkk1O54908 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Dkk1O54908 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Dkk1O54908 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Dkk1O54908 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.87■□□□□ 0.45
Dkk1O54908 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Dkk1O54908 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Dkk1O54908 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Dkk1O54908 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Dkk1O54908 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Dkk1O54908 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.86■□□□□ 0.45
Dkk1O54908 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Dkk1O54908 Gm45878-201ENSMUST00000211839 241 ntBASIC17.86■□□□□ 0.45
Dkk1O54908 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Dkk1O54908 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Dkk1O54908 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms