Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.16■■□□□ 1.3
TRIM38O00635 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
TRIM38O00635 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIM38O00635 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM38O00635 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.15■■□□□ 1.3
TRIM38O00635 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
TRIM38O00635 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM38O00635 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
TRIM38O00635 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM38O00635 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.15■■□□□ 1.3
TRIM38O00635 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM38O00635 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.15■■□□□ 1.3
TRIM38O00635 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.15■■□□□ 1.3
TRIM38O00635 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.15■■□□□ 1.3
TRIM38O00635 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM38O00635 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
TRIM38O00635 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.14■■□□□ 1.29
TRIM38O00635 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.14■■□□□ 1.29
TRIM38O00635 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM38O00635 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM38O00635 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM38O00635 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.13■■□□□ 1.29
TRIM38O00635 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM38O00635 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM38O00635 AC131281.2-201ENST00000520478 145 ntBASIC23.13■■□□□ 1.29
TRIM38O00635 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.13■■□□□ 1.29
TRIM38O00635 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
TRIM38O00635 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM38O00635 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.13■■□□□ 1.29
TRIM38O00635 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM38O00635 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM38O00635 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
TRIM38O00635 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
TRIM38O00635 MIR935-201ENST00000401179 91 ntBASIC23.12■■□□□ 1.29
TRIM38O00635 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.12■■□□□ 1.29
TRIM38O00635 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.12■■□□□ 1.29
TRIM38O00635 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.12■■□□□ 1.29
TRIM38O00635 AC010997.5-201ENST00000609182 354 ntBASIC23.12■■□□□ 1.29
TRIM38O00635 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.12■■□□□ 1.29
TRIM38O00635 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM38O00635 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.12■■□□□ 1.29
TRIM38O00635 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM38O00635 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM38O00635 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
TRIM38O00635 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM38O00635 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM38O00635 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM38O00635 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.11■■□□□ 1.29
TRIM38O00635 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.11■■□□□ 1.29
TRIM38O00635 AC011551.1-201ENST00000614101 683 ntBASIC23.11■■□□□ 1.29
TRIM38O00635 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.11■■□□□ 1.29
TRIM38O00635 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM38O00635 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM38O00635 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
TRIM38O00635 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
TRIM38O00635 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM38O00635 MIR638-201ENST00000385237 100 ntBASIC23.1■■□□□ 1.29
TRIM38O00635 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM38O00635 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM38O00635 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.09■■□□□ 1.29
TRIM38O00635 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
TRIM38O00635 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.09■■□□□ 1.29
TRIM38O00635 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.09■■□□□ 1.29
TRIM38O00635 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.09■■□□□ 1.29
TRIM38O00635 AL117332.1-201ENST00000622628 974 ntBASIC23.09■■□□□ 1.29
TRIM38O00635 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM38O00635 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM38O00635 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM38O00635 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
TRIM38O00635 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.09■■□□□ 1.29
TRIM38O00635 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM38O00635 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.08■■□□□ 1.29
TRIM38O00635 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.08■■□□□ 1.29
TRIM38O00635 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.08■■□□□ 1.29
TRIM38O00635 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM38O00635 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM38O00635 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.08■■□□□ 1.28
TRIM38O00635 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.08■■□□□ 1.28
TRIM38O00635 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM38O00635 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.07■■□□□ 1.28
TRIM38O00635 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
TRIM38O00635 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM38O00635 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.07■■□□□ 1.28
TRIM38O00635 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.07■■□□□ 1.28
TRIM38O00635 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM38O00635 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM38O00635 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM38O00635 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.06■■□□□ 1.28
TRIM38O00635 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM38O00635 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM38O00635 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.06■■□□□ 1.28
TRIM38O00635 AL136116.3-201ENST00000402907 1138 ntBASIC23.06■■□□□ 1.28
TRIM38O00635 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM38O00635 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.06■■□□□ 1.28
TRIM38O00635 MTDHP2-201ENST00000601468 714 ntBASIC23.06■■□□□ 1.28
TRIM38O00635 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM38O00635 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
TRIM38O00635 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
TRIM38O00635 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM38O00635 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms