Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC32.1■■■□□ 2.73
Ccdc141E9Q8Q6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
Ccdc141E9Q8Q6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
Ccdc141E9Q8Q6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC32.1■■■□□ 2.73
Ccdc141E9Q8Q6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC32.1■■■□□ 2.73
Ccdc141E9Q8Q6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC32.1■■■□□ 2.73
Ccdc141E9Q8Q6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
Ccdc141E9Q8Q6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
Ccdc141E9Q8Q6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
Ccdc141E9Q8Q6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Ccdc141E9Q8Q6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Ccdc141E9Q8Q6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC32.08■■■□□ 2.73
Ccdc141E9Q8Q6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
Ccdc141E9Q8Q6 Gm6085-201ENSMUST00000182774 1470 ntBASIC32.08■■■□□ 2.73
Ccdc141E9Q8Q6 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Ccdc141E9Q8Q6 Gm26833-201ENSMUST00000180899 440 ntBASIC32.08■■■□□ 2.73
Ccdc141E9Q8Q6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC32.08■■■□□ 2.73
Ccdc141E9Q8Q6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Ccdc141E9Q8Q6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
Ccdc141E9Q8Q6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Ccdc141E9Q8Q6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Ccdc141E9Q8Q6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC32.06■■■□□ 2.72
Ccdc141E9Q8Q6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC32.06■■■□□ 2.72
Ccdc141E9Q8Q6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
Ccdc141E9Q8Q6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC32.06■■■□□ 2.72
Ccdc141E9Q8Q6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Ccdc141E9Q8Q6 Gm10493-201ENSMUST00000097270 612 ntBASIC32.05■■■□□ 2.72
Ccdc141E9Q8Q6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Ccdc141E9Q8Q6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Ccdc141E9Q8Q6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Ccdc141E9Q8Q6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Ccdc141E9Q8Q6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Ccdc141E9Q8Q6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Ccdc141E9Q8Q6 Gm7160-202ENSMUST00000188519 1027 ntBASIC32.05■■■□□ 2.72
Ccdc141E9Q8Q6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC32.05■■■□□ 2.72
Ccdc141E9Q8Q6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC32.05■■■□□ 2.72
Ccdc141E9Q8Q6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Ccdc141E9Q8Q6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC32.04■■■□□ 2.72
Ccdc141E9Q8Q6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC32.04■■■□□ 2.72
Ccdc141E9Q8Q6 Gm27405-201ENSMUST00000184201 112 ntBASIC32.04■■■□□ 2.72
Ccdc141E9Q8Q6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
Ccdc141E9Q8Q6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC32.04■■■□□ 2.72
Ccdc141E9Q8Q6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC32.03■■■□□ 2.72
Ccdc141E9Q8Q6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Ccdc141E9Q8Q6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC32.03■■■□□ 2.72
Ccdc141E9Q8Q6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC32.02■■■□□ 2.72
Ccdc141E9Q8Q6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Ccdc141E9Q8Q6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.72
Ccdc141E9Q8Q6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC32■■■□□ 2.71
Ccdc141E9Q8Q6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC32■■■□□ 2.71
Ccdc141E9Q8Q6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC32■■■□□ 2.71
Ccdc141E9Q8Q6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC32■■■□□ 2.71
Ccdc141E9Q8Q6 Gm43530-201ENSMUST00000195920 274 ntBASIC32■■■□□ 2.71
Ccdc141E9Q8Q6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Ccdc141E9Q8Q6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Ccdc141E9Q8Q6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Ccdc141E9Q8Q6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Ccdc141E9Q8Q6 Gm42569-201ENSMUST00000200539 472 ntBASIC31.99■■■□□ 2.71
Ccdc141E9Q8Q6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Ccdc141E9Q8Q6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Ccdc141E9Q8Q6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Ccdc141E9Q8Q6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Ccdc141E9Q8Q6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Ccdc141E9Q8Q6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Ccdc141E9Q8Q6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
Ccdc141E9Q8Q6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Ccdc141E9Q8Q6 AC099934.2-201ENSMUST00000196389 70 ntBASIC31.98■■■□□ 2.71
Ccdc141E9Q8Q6 AC156953.1-201ENSMUST00000196953 70 ntBASIC31.98■■■□□ 2.71
Ccdc141E9Q8Q6 AC157822.2-201ENSMUST00000200291 70 ntBASIC31.98■■■□□ 2.71
Ccdc141E9Q8Q6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC31.98■■■□□ 2.71
Ccdc141E9Q8Q6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Ccdc141E9Q8Q6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ccdc141E9Q8Q6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC31.97■■■□□ 2.71
Ccdc141E9Q8Q6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ccdc141E9Q8Q6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Ccdc141E9Q8Q6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Ccdc141E9Q8Q6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Ccdc141E9Q8Q6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
Ccdc141E9Q8Q6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC31.95■■■□□ 2.7
Ccdc141E9Q8Q6 Gm37179-201ENSMUST00000194862 823 ntBASIC31.95■■■□□ 2.7
Ccdc141E9Q8Q6 Gm43060-201ENSMUST00000200621 289 ntBASIC31.95■■■□□ 2.7
Ccdc141E9Q8Q6 Gm40848-201ENSMUST00000221998 324 ntBASIC31.95■■■□□ 2.7
Ccdc141E9Q8Q6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC31.95■■■□□ 2.7
Ccdc141E9Q8Q6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
Ccdc141E9Q8Q6 Gm10129-202ENSMUST00000193100 1316 ntBASIC31.94■■■□□ 2.7
Ccdc141E9Q8Q6 Spcs1-207ENSMUST00000228767 1008 ntBASIC31.94■■■□□ 2.7
Ccdc141E9Q8Q6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Ccdc141E9Q8Q6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
Ccdc141E9Q8Q6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ccdc141E9Q8Q6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ccdc141E9Q8Q6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
Ccdc141E9Q8Q6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ccdc141E9Q8Q6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ccdc141E9Q8Q6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ccdc141E9Q8Q6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ccdc141E9Q8Q6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ccdc141E9Q8Q6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ccdc141E9Q8Q6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Ccdc141E9Q8Q6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC31.92■■■□□ 2.7
Ccdc141E9Q8Q6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC31.92■■■□□ 2.7
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms