Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm10493-201ENSMUST00000097270 612 ntBASIC29.96■■■□□ 2.39
Hfm1D3Z4R1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC29.95■■■□□ 2.39
Hfm1D3Z4R1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Hfm1D3Z4R1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC29.94■■■□□ 2.38
Hfm1D3Z4R1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC29.94■■■□□ 2.38
Hfm1D3Z4R1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Hfm1D3Z4R1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC29.94■■■□□ 2.38
Hfm1D3Z4R1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Hfm1D3Z4R1 Spcs1-204ENSMUST00000226782 949 ntBASIC29.94■■■□□ 2.38
Hfm1D3Z4R1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
Hfm1D3Z4R1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
Hfm1D3Z4R1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC29.93■■■□□ 2.38
Hfm1D3Z4R1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Hfm1D3Z4R1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Hfm1D3Z4R1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
Hfm1D3Z4R1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC29.93■■■□□ 2.38
Hfm1D3Z4R1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Hfm1D3Z4R1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Hfm1D3Z4R1 Gm26833-201ENSMUST00000180899 440 ntBASIC29.92■■■□□ 2.38
Hfm1D3Z4R1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
Hfm1D3Z4R1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Hfm1D3Z4R1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Hfm1D3Z4R1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Hfm1D3Z4R1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Hfm1D3Z4R1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Hfm1D3Z4R1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Hfm1D3Z4R1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC29.91■■■□□ 2.38
Hfm1D3Z4R1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
Hfm1D3Z4R1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Hfm1D3Z4R1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Hfm1D3Z4R1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC29.9■■■□□ 2.38
Hfm1D3Z4R1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC29.9■■■□□ 2.38
Hfm1D3Z4R1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
Hfm1D3Z4R1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Hfm1D3Z4R1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Hfm1D3Z4R1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Hfm1D3Z4R1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
Hfm1D3Z4R1 Gm42569-201ENSMUST00000200539 472 ntBASIC29.88■■■□□ 2.37
Hfm1D3Z4R1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC29.88■■■□□ 2.37
Hfm1D3Z4R1 Gm7160-202ENSMUST00000188519 1027 ntBASIC29.88■■■□□ 2.37
Hfm1D3Z4R1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC29.88■■■□□ 2.37
Hfm1D3Z4R1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC29.87■■■□□ 2.37
Hfm1D3Z4R1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Hfm1D3Z4R1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
Hfm1D3Z4R1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC29.87■■■□□ 2.37
Hfm1D3Z4R1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Hfm1D3Z4R1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Hfm1D3Z4R1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Hfm1D3Z4R1 Gm37179-201ENSMUST00000194862 823 ntBASIC29.86■■■□□ 2.37
Hfm1D3Z4R1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
Hfm1D3Z4R1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Hfm1D3Z4R1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Hfm1D3Z4R1 Gm43060-201ENSMUST00000200621 289 ntBASIC29.85■■■□□ 2.37
Hfm1D3Z4R1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Hfm1D3Z4R1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Hfm1D3Z4R1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
Hfm1D3Z4R1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC29.84■■■□□ 2.37
Hfm1D3Z4R1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Hfm1D3Z4R1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Hfm1D3Z4R1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC29.83■■■□□ 2.37
Hfm1D3Z4R1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC29.83■■■□□ 2.37
Hfm1D3Z4R1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Hfm1D3Z4R1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Hfm1D3Z4R1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Hfm1D3Z4R1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Hfm1D3Z4R1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC29.82■■■□□ 2.36
Hfm1D3Z4R1 AC099934.2-201ENSMUST00000196389 70 ntBASIC29.82■■■□□ 2.36
Hfm1D3Z4R1 AC156953.1-201ENSMUST00000196953 70 ntBASIC29.82■■■□□ 2.36
Hfm1D3Z4R1 AC157822.2-201ENSMUST00000200291 70 ntBASIC29.82■■■□□ 2.36
Hfm1D3Z4R1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC29.82■■■□□ 2.36
Hfm1D3Z4R1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
Hfm1D3Z4R1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
Hfm1D3Z4R1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Hfm1D3Z4R1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Hfm1D3Z4R1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Hfm1D3Z4R1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC29.81■■■□□ 2.36
Hfm1D3Z4R1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
Hfm1D3Z4R1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Hfm1D3Z4R1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Hfm1D3Z4R1 Gm10129-202ENSMUST00000193100 1316 ntBASIC29.8■■■□□ 2.36
Hfm1D3Z4R1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Hfm1D3Z4R1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC29.79■■■□□ 2.36
Hfm1D3Z4R1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC29.79■■■□□ 2.36
Hfm1D3Z4R1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
Hfm1D3Z4R1 Gm43530-201ENSMUST00000195920 274 ntBASIC29.79■■■□□ 2.36
Hfm1D3Z4R1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Hfm1D3Z4R1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Hfm1D3Z4R1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Hfm1D3Z4R1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
Hfm1D3Z4R1 Gm27011-201ENSMUST00000182352 972 ntBASIC29.78■■■□□ 2.36
Hfm1D3Z4R1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Hfm1D3Z4R1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Hfm1D3Z4R1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Hfm1D3Z4R1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC29.78■■■□□ 2.36
Hfm1D3Z4R1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Hfm1D3Z4R1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC29.77■■■□□ 2.36
Hfm1D3Z4R1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC29.77■■■□□ 2.36
Hfm1D3Z4R1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Hfm1D3Z4R1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Hfm1D3Z4R1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms