Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TRBV9A0A0B4J1U6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.33■□□□□ 0.53
TRBV9A0A0B4J1U6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV9A0A0B4J1U6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV9A0A0B4J1U6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.33■□□□□ 0.52
TRBV9A0A0B4J1U6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV9A0A0B4J1U6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.33■□□□□ 0.52
TRBV9A0A0B4J1U6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV9A0A0B4J1U6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.33■□□□□ 0.52
TRBV9A0A0B4J1U6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.33■□□□□ 0.52
TRBV9A0A0B4J1U6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TRBV9A0A0B4J1U6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV9A0A0B4J1U6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.33■□□□□ 0.52
TRBV9A0A0B4J1U6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV9A0A0B4J1U6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV9A0A0B4J1U6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV9A0A0B4J1U6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV9A0A0B4J1U6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV9A0A0B4J1U6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.32■□□□□ 0.52
TRBV9A0A0B4J1U6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV9A0A0B4J1U6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.32■□□□□ 0.52
TRBV9A0A0B4J1U6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV9A0A0B4J1U6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV9A0A0B4J1U6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV9A0A0B4J1U6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRBV9A0A0B4J1U6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV9A0A0B4J1U6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.31■□□□□ 0.52
TRBV9A0A0B4J1U6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV9A0A0B4J1U6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV9A0A0B4J1U6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV9A0A0B4J1U6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.31■□□□□ 0.52
TRBV9A0A0B4J1U6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV9A0A0B4J1U6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.31■□□□□ 0.52
TRBV9A0A0B4J1U6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRBV9A0A0B4J1U6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV9A0A0B4J1U6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.31■□□□□ 0.52
TRBV9A0A0B4J1U6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV9A0A0B4J1U6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV9A0A0B4J1U6 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.3■□□□□ 0.52
TRBV9A0A0B4J1U6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TRBV9A0A0B4J1U6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TRBV9A0A0B4J1U6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.3■□□□□ 0.52
TRBV9A0A0B4J1U6 AC022616.5-201ENST00000518796 181 ntBASIC18.3■□□□□ 0.52
TRBV9A0A0B4J1U6 AL033527.3-201ENST00000566366 1196 ntBASIC18.3■□□□□ 0.52
TRBV9A0A0B4J1U6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.3■□□□□ 0.52
TRBV9A0A0B4J1U6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV9A0A0B4J1U6 BHLHE23-202ENST00000612929 1109 ntBASIC18.3■□□□□ 0.52
TRBV9A0A0B4J1U6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV9A0A0B4J1U6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.3■□□□□ 0.52
TRBV9A0A0B4J1U6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.3■□□□□ 0.52
TRBV9A0A0B4J1U6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRBV9A0A0B4J1U6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.3■□□□□ 0.52
TRBV9A0A0B4J1U6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV9A0A0B4J1U6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV9A0A0B4J1U6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.3■□□□□ 0.52
TRBV9A0A0B4J1U6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV9A0A0B4J1U6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV9A0A0B4J1U6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV9A0A0B4J1U6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV9A0A0B4J1U6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.29■□□□□ 0.52
TRBV9A0A0B4J1U6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV9A0A0B4J1U6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV9A0A0B4J1U6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.29■□□□□ 0.52
TRBV9A0A0B4J1U6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.29■□□□□ 0.52
TRBV9A0A0B4J1U6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.28■□□□□ 0.52
TRBV9A0A0B4J1U6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV9A0A0B4J1U6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV9A0A0B4J1U6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.28■□□□□ 0.52
TRBV9A0A0B4J1U6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.28■□□□□ 0.52
TRBV9A0A0B4J1U6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.28■□□□□ 0.52
TRBV9A0A0B4J1U6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV9A0A0B4J1U6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV9A0A0B4J1U6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV9A0A0B4J1U6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV9A0A0B4J1U6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.27■□□□□ 0.52
TRBV9A0A0B4J1U6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV9A0A0B4J1U6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV9A0A0B4J1U6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV9A0A0B4J1U6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRBV9A0A0B4J1U6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV9A0A0B4J1U6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRBV9A0A0B4J1U6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV9A0A0B4J1U6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRBV9A0A0B4J1U6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV9A0A0B4J1U6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRBV9A0A0B4J1U6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV9A0A0B4J1U6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.26■□□□□ 0.51
TRBV9A0A0B4J1U6 PVT1_1.1-201ENST00000615125 194 ntBASIC18.26■□□□□ 0.51
TRBV9A0A0B4J1U6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.26■□□□□ 0.51
TRBV9A0A0B4J1U6 AC090877.2-201ENST00000558441 1738 ntBASIC18.26■□□□□ 0.51
TRBV9A0A0B4J1U6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV9A0A0B4J1U6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV9A0A0B4J1U6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRBV9A0A0B4J1U6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV9A0A0B4J1U6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV9A0A0B4J1U6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV9A0A0B4J1U6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV9A0A0B4J1U6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV9A0A0B4J1U6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV9A0A0B4J1U6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms