Protein–RNA interactions for Protein: A0A0B4J1J5

Ighv9-3, Immunoglobulin heavy variable V9-3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-3A0A0B4J1J5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.29■□□□□ 0.36
Ighv9-3A0A0B4J1J5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv9-3A0A0B4J1J5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv9-3A0A0B4J1J5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Ighv9-3A0A0B4J1J5 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv9-3A0A0B4J1J5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv9-3A0A0B4J1J5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv9-3A0A0B4J1J5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv9-3A0A0B4J1J5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ighv9-3A0A0B4J1J5 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ighv9-3A0A0B4J1J5 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv9-3A0A0B4J1J5 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv9-3A0A0B4J1J5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv9-3A0A0B4J1J5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ighv9-3A0A0B4J1J5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Ighv9-3A0A0B4J1J5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.27■□□□□ 0.36
Ighv9-3A0A0B4J1J5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.27■□□□□ 0.36
Ighv9-3A0A0B4J1J5 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv9-3A0A0B4J1J5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.26■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv9-3A0A0B4J1J5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv9-3A0A0B4J1J5 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.25■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv9-3A0A0B4J1J5 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.24■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.23■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.23■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.22■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.21■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.21■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv9-3A0A0B4J1J5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.21■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv9-3A0A0B4J1J5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.2■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.2■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.19■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.19■□□□□ 0.34
Ighv9-3A0A0B4J1J5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.19■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.19■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv9-3A0A0B4J1J5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms