Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.44■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv12-2A0A0B4J1H1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.44■□□□□ 0.22
Trbv12-2A0A0B4J1H1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.43■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.42■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv12-2A0A0B4J1H1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.41■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.41■□□□□ 0.22
Trbv12-2A0A0B4J1H1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv12-2A0A0B4J1H1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.41■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.4■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.39■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.39■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv12-2A0A0B4J1H1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.39■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.38■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.38■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.38■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.37■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trbv12-2A0A0B4J1H1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.37■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv12-2A0A0B4J1H1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms