Protein–RNA interactions for Protein: A0A0A6YXJ9

Ighv1-12, Immunoglobulin heavy variable V1-12 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-12A0A0A6YXJ9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.63■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.63■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.61■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.6■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.59■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.59■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.59■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ighv1-12A0A0A6YXJ9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.58■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Gm44949-201ENSMUST00000206423 1450 ntBASIC15.58■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.57■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.56■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Gm10399-202ENSMUST00000202768 748 ntBASIC15.56■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.56■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC15.55■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.55■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.55■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-12A0A0A6YXJ9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms