Protein–RNA interactions for Protein: Q9D9Z7

Subh2bv, Histone H2B subacrosomal variant, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Subh2bvQ9D9Z7 Mir3960-201ENSMUST00000198213 73 ntBASIC20.32■□□□□ 0.84
Subh2bvQ9D9Z7 Gm45364-201ENSMUST00000210883 159 ntBASIC20.32■□□□□ 0.84
Subh2bvQ9D9Z7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Subh2bvQ9D9Z7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Subh2bvQ9D9Z7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Subh2bvQ9D9Z7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Subh2bvQ9D9Z7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Subh2bvQ9D9Z7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.31■□□□□ 0.84
Subh2bvQ9D9Z7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Subh2bvQ9D9Z7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Subh2bvQ9D9Z7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Subh2bvQ9D9Z7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Subh2bvQ9D9Z7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Subh2bvQ9D9Z7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Subh2bvQ9D9Z7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Subh2bvQ9D9Z7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Subh2bvQ9D9Z7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Subh2bvQ9D9Z7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Subh2bvQ9D9Z7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Subh2bvQ9D9Z7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.29■□□□□ 0.84
Subh2bvQ9D9Z7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Subh2bvQ9D9Z7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Subh2bvQ9D9Z7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Subh2bvQ9D9Z7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Subh2bvQ9D9Z7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Subh2bvQ9D9Z7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Subh2bvQ9D9Z7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Subh2bvQ9D9Z7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Subh2bvQ9D9Z7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Subh2bvQ9D9Z7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Subh2bvQ9D9Z7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.28■□□□□ 0.84
Subh2bvQ9D9Z7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Subh2bvQ9D9Z7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Subh2bvQ9D9Z7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Subh2bvQ9D9Z7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Subh2bvQ9D9Z7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Subh2bvQ9D9Z7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Subh2bvQ9D9Z7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Subh2bvQ9D9Z7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Subh2bvQ9D9Z7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Subh2bvQ9D9Z7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Subh2bvQ9D9Z7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Subh2bvQ9D9Z7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Subh2bvQ9D9Z7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Subh2bvQ9D9Z7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.27■□□□□ 0.84
Subh2bvQ9D9Z7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Subh2bvQ9D9Z7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Subh2bvQ9D9Z7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.27■□□□□ 0.84
Subh2bvQ9D9Z7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.27■□□□□ 0.84
Subh2bvQ9D9Z7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Subh2bvQ9D9Z7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Subh2bvQ9D9Z7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
Subh2bvQ9D9Z7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Subh2bvQ9D9Z7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Subh2bvQ9D9Z7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Subh2bvQ9D9Z7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.25■□□□□ 0.83
Subh2bvQ9D9Z7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Subh2bvQ9D9Z7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Subh2bvQ9D9Z7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.25■□□□□ 0.83
Subh2bvQ9D9Z7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Subh2bvQ9D9Z7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.25■□□□□ 0.83
Subh2bvQ9D9Z7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Subh2bvQ9D9Z7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Subh2bvQ9D9Z7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Subh2bvQ9D9Z7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Subh2bvQ9D9Z7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Subh2bvQ9D9Z7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.24■□□□□ 0.83
Subh2bvQ9D9Z7 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.24■□□□□ 0.83
Subh2bvQ9D9Z7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.24■□□□□ 0.83
Subh2bvQ9D9Z7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Subh2bvQ9D9Z7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Subh2bvQ9D9Z7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Subh2bvQ9D9Z7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Subh2bvQ9D9Z7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Subh2bvQ9D9Z7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Subh2bvQ9D9Z7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Subh2bvQ9D9Z7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Subh2bvQ9D9Z7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Subh2bvQ9D9Z7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Subh2bvQ9D9Z7 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.23■□□□□ 0.83
Subh2bvQ9D9Z7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Subh2bvQ9D9Z7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Subh2bvQ9D9Z7 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.22■□□□□ 0.83
Subh2bvQ9D9Z7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Subh2bvQ9D9Z7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.22■□□□□ 0.83
Subh2bvQ9D9Z7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Subh2bvQ9D9Z7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Subh2bvQ9D9Z7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Subh2bvQ9D9Z7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Subh2bvQ9D9Z7 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.21■□□□□ 0.83
Subh2bvQ9D9Z7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Subh2bvQ9D9Z7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.21■□□□□ 0.83
Subh2bvQ9D9Z7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Subh2bvQ9D9Z7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Subh2bvQ9D9Z7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Subh2bvQ9D9Z7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.21■□□□□ 0.83
Subh2bvQ9D9Z7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Subh2bvQ9D9Z7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Subh2bvQ9D9Z7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Subh2bvQ9D9Z7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms