Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mbd3l1Q9D9H3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mbd3l1Q9D9H3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Mbd3l1Q9D9H3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mbd3l1Q9D9H3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mbd3l1Q9D9H3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mbd3l1Q9D9H3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Mbd3l1Q9D9H3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mbd3l1Q9D9H3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Mbd3l1Q9D9H3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mbd3l1Q9D9H3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mbd3l1Q9D9H3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mbd3l1Q9D9H3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Mbd3l1Q9D9H3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mbd3l1Q9D9H3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mbd3l1Q9D9H3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Mbd3l1Q9D9H3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mbd3l1Q9D9H3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Mbd3l1Q9D9H3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mbd3l1Q9D9H3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Mbd3l1Q9D9H3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mbd3l1Q9D9H3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.09■□□□□ 0.49
Mbd3l1Q9D9H3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mbd3l1Q9D9H3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mbd3l1Q9D9H3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mbd3l1Q9D9H3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mbd3l1Q9D9H3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mbd3l1Q9D9H3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mbd3l1Q9D9H3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mbd3l1Q9D9H3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mbd3l1Q9D9H3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Mbd3l1Q9D9H3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mbd3l1Q9D9H3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mbd3l1Q9D9H3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Mbd3l1Q9D9H3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mbd3l1Q9D9H3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Mbd3l1Q9D9H3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mbd3l1Q9D9H3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Mbd3l1Q9D9H3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mbd3l1Q9D9H3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.07■□□□□ 0.48
Mbd3l1Q9D9H3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mbd3l1Q9D9H3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.07■□□□□ 0.48
Mbd3l1Q9D9H3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Mbd3l1Q9D9H3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mbd3l1Q9D9H3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Mbd3l1Q9D9H3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Mbd3l1Q9D9H3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Mbd3l1Q9D9H3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Mbd3l1Q9D9H3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mbd3l1Q9D9H3 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.06■□□□□ 0.48
Mbd3l1Q9D9H3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Mbd3l1Q9D9H3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Mbd3l1Q9D9H3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mbd3l1Q9D9H3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.06■□□□□ 0.48
Mbd3l1Q9D9H3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mbd3l1Q9D9H3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mbd3l1Q9D9H3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mbd3l1Q9D9H3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Mbd3l1Q9D9H3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mbd3l1Q9D9H3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mbd3l1Q9D9H3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mbd3l1Q9D9H3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mbd3l1Q9D9H3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mbd3l1Q9D9H3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Mbd3l1Q9D9H3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Mbd3l1Q9D9H3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Mbd3l1Q9D9H3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mbd3l1Q9D9H3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mbd3l1Q9D9H3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
Mbd3l1Q9D9H3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Mbd3l1Q9D9H3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Mbd3l1Q9D9H3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Mbd3l1Q9D9H3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.04■□□□□ 0.48
Mbd3l1Q9D9H3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.04■□□□□ 0.48
Mbd3l1Q9D9H3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Mbd3l1Q9D9H3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.03■□□□□ 0.48
Mbd3l1Q9D9H3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Mbd3l1Q9D9H3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mbd3l1Q9D9H3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mbd3l1Q9D9H3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Mbd3l1Q9D9H3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.03■□□□□ 0.48
Mbd3l1Q9D9H3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.03■□□□□ 0.48
Mbd3l1Q9D9H3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mbd3l1Q9D9H3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mbd3l1Q9D9H3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mbd3l1Q9D9H3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Mbd3l1Q9D9H3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mbd3l1Q9D9H3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mbd3l1Q9D9H3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mbd3l1Q9D9H3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Mbd3l1Q9D9H3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mbd3l1Q9D9H3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mbd3l1Q9D9H3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mbd3l1Q9D9H3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mbd3l1Q9D9H3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Mbd3l1Q9D9H3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mbd3l1Q9D9H3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Mbd3l1Q9D9H3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mbd3l1Q9D9H3 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.01■□□□□ 0.47
Mbd3l1Q9D9H3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms