Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmem54Q9D7S1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmem54Q9D7S1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.37■□□□□ 0.53
Tmem54Q9D7S1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmem54Q9D7S1 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.37■□□□□ 0.53
Tmem54Q9D7S1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmem54Q9D7S1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tmem54Q9D7S1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Tmem54Q9D7S1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.36■□□□□ 0.53
Tmem54Q9D7S1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tmem54Q9D7S1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.36■□□□□ 0.53
Tmem54Q9D7S1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmem54Q9D7S1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmem54Q9D7S1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.35■□□□□ 0.53
Tmem54Q9D7S1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tmem54Q9D7S1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tmem54Q9D7S1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.35■□□□□ 0.53
Tmem54Q9D7S1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.35■□□□□ 0.53
Tmem54Q9D7S1 Gm40881-201ENSMUST00000223397 166 ntBASIC18.35■□□□□ 0.53
Tmem54Q9D7S1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tmem54Q9D7S1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tmem54Q9D7S1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Tmem54Q9D7S1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tmem54Q9D7S1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tmem54Q9D7S1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tmem54Q9D7S1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tmem54Q9D7S1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tmem54Q9D7S1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tmem54Q9D7S1 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.33■□□□□ 0.53
Tmem54Q9D7S1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tmem54Q9D7S1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tmem54Q9D7S1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.33■□□□□ 0.52
Tmem54Q9D7S1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tmem54Q9D7S1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tmem54Q9D7S1 Gm9959-201ENSMUST00000068277 390 ntBASIC18.33■□□□□ 0.52
Tmem54Q9D7S1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.33■□□□□ 0.52
Tmem54Q9D7S1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tmem54Q9D7S1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmem54Q9D7S1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmem54Q9D7S1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmem54Q9D7S1 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.32■□□□□ 0.52
Tmem54Q9D7S1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmem54Q9D7S1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmem54Q9D7S1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem54Q9D7S1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tmem54Q9D7S1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem54Q9D7S1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Tmem54Q9D7S1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tmem54Q9D7S1 Etf1-202ENSMUST00000180351 108 ntBASIC18.31■□□□□ 0.52
Tmem54Q9D7S1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.31■□□□□ 0.52
Tmem54Q9D7S1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem54Q9D7S1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem54Q9D7S1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem54Q9D7S1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem54Q9D7S1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem54Q9D7S1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem54Q9D7S1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem54Q9D7S1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Tmem54Q9D7S1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem54Q9D7S1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.3■□□□□ 0.52
Tmem54Q9D7S1 Rps24-207ENSMUST00000224568 714 ntBASIC18.3■□□□□ 0.52
Tmem54Q9D7S1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem54Q9D7S1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Tmem54Q9D7S1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem54Q9D7S1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem54Q9D7S1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem54Q9D7S1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem54Q9D7S1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
Tmem54Q9D7S1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Tmem54Q9D7S1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.29■□□□□ 0.52
Tmem54Q9D7S1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tmem54Q9D7S1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tmem54Q9D7S1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.29■□□□□ 0.52
Tmem54Q9D7S1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tmem54Q9D7S1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tmem54Q9D7S1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tmem54Q9D7S1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tmem54Q9D7S1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmem54Q9D7S1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Tmem54Q9D7S1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tmem54Q9D7S1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmem54Q9D7S1 Gm45102-201ENSMUST00000207427 857 ntBASIC18.28■□□□□ 0.52
Tmem54Q9D7S1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Tmem54Q9D7S1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tmem54Q9D7S1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.27■□□□□ 0.52
Tmem54Q9D7S1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.27■□□□□ 0.52
Tmem54Q9D7S1 Gm7417-201ENSMUST00000192950 473 ntBASIC18.27■□□□□ 0.52
Tmem54Q9D7S1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tmem54Q9D7S1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tmem54Q9D7S1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tmem54Q9D7S1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tmem54Q9D7S1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tmem54Q9D7S1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.27■□□□□ 0.51
Tmem54Q9D7S1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tmem54Q9D7S1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Tmem54Q9D7S1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tmem54Q9D7S1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Tmem54Q9D7S1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.26■□□□□ 0.51
Tmem54Q9D7S1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tmem54Q9D7S1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms