Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lsm7Q9CQQ8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lsm7Q9CQQ8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Lsm7Q9CQQ8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsm7Q9CQQ8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Lsm7Q9CQQ8 Gm13241-201ENSMUST00000094493 780 ntBASIC21.17■□□□□ 0.98
Lsm7Q9CQQ8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsm7Q9CQQ8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Lsm7Q9CQQ8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsm7Q9CQQ8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lsm7Q9CQQ8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
Lsm7Q9CQQ8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.16■□□□□ 0.98
Lsm7Q9CQQ8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lsm7Q9CQQ8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsm7Q9CQQ8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lsm7Q9CQQ8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
Lsm7Q9CQQ8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.16■□□□□ 0.98
Lsm7Q9CQQ8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsm7Q9CQQ8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Lsm7Q9CQQ8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lsm7Q9CQQ8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lsm7Q9CQQ8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Lsm7Q9CQQ8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lsm7Q9CQQ8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Lsm7Q9CQQ8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lsm7Q9CQQ8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lsm7Q9CQQ8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lsm7Q9CQQ8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lsm7Q9CQQ8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lsm7Q9CQQ8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Lsm7Q9CQQ8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lsm7Q9CQQ8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lsm7Q9CQQ8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lsm7Q9CQQ8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.14■□□□□ 0.97
Lsm7Q9CQQ8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lsm7Q9CQQ8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lsm7Q9CQQ8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lsm7Q9CQQ8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lsm7Q9CQQ8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.13■□□□□ 0.97
Lsm7Q9CQQ8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Lsm7Q9CQQ8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Lsm7Q9CQQ8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lsm7Q9CQQ8 Gm12922-201ENSMUST00000120626 809 ntBASIC21.12■□□□□ 0.97
Lsm7Q9CQQ8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.12■□□□□ 0.97
Lsm7Q9CQQ8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.12■□□□□ 0.97
Lsm7Q9CQQ8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lsm7Q9CQQ8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Lsm7Q9CQQ8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lsm7Q9CQQ8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lsm7Q9CQQ8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
Lsm7Q9CQQ8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Lsm7Q9CQQ8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lsm7Q9CQQ8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lsm7Q9CQQ8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lsm7Q9CQQ8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.1■□□□□ 0.97
Lsm7Q9CQQ8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.1■□□□□ 0.97
Lsm7Q9CQQ8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lsm7Q9CQQ8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.1■□□□□ 0.97
Lsm7Q9CQQ8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lsm7Q9CQQ8 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.1■□□□□ 0.97
Lsm7Q9CQQ8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lsm7Q9CQQ8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lsm7Q9CQQ8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.09■□□□□ 0.97
Lsm7Q9CQQ8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Lsm7Q9CQQ8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.09■□□□□ 0.97
Lsm7Q9CQQ8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lsm7Q9CQQ8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lsm7Q9CQQ8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Lsm7Q9CQQ8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lsm7Q9CQQ8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.08■□□□□ 0.97
Lsm7Q9CQQ8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lsm7Q9CQQ8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lsm7Q9CQQ8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.08■□□□□ 0.97
Lsm7Q9CQQ8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.08■□□□□ 0.97
Lsm7Q9CQQ8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lsm7Q9CQQ8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lsm7Q9CQQ8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm7Q9CQQ8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm7Q9CQQ8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm7Q9CQQ8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm7Q9CQQ8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm7Q9CQQ8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm7Q9CQQ8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm7Q9CQQ8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lsm7Q9CQQ8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.06■□□□□ 0.96
Lsm7Q9CQQ8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lsm7Q9CQQ8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Lsm7Q9CQQ8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lsm7Q9CQQ8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Lsm7Q9CQQ8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lsm7Q9CQQ8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Lsm7Q9CQQ8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lsm7Q9CQQ8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lsm7Q9CQQ8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lsm7Q9CQQ8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lsm7Q9CQQ8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lsm7Q9CQQ8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lsm7Q9CQQ8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Lsm7Q9CQQ8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.04■□□□□ 0.96
Lsm7Q9CQQ8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms