Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Tpgs1Q99MS8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tpgs1Q99MS8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.93■■□□□ 1.1
Tpgs1Q99MS8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tpgs1Q99MS8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.93■■□□□ 1.1
Tpgs1Q99MS8 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.93■■□□□ 1.1
Tpgs1Q99MS8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tpgs1Q99MS8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tpgs1Q99MS8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tpgs1Q99MS8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tpgs1Q99MS8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Tpgs1Q99MS8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.92■■□□□ 1.1
Tpgs1Q99MS8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tpgs1Q99MS8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.92■■□□□ 1.1
Tpgs1Q99MS8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Tpgs1Q99MS8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Tpgs1Q99MS8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tpgs1Q99MS8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tpgs1Q99MS8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tpgs1Q99MS8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tpgs1Q99MS8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.9■■□□□ 1.1
Tpgs1Q99MS8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.9■■□□□ 1.1
Tpgs1Q99MS8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tpgs1Q99MS8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Tpgs1Q99MS8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tpgs1Q99MS8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Tpgs1Q99MS8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Tpgs1Q99MS8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.89■■□□□ 1.09
Tpgs1Q99MS8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tpgs1Q99MS8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tpgs1Q99MS8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tpgs1Q99MS8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tpgs1Q99MS8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tpgs1Q99MS8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.88■■□□□ 1.09
Tpgs1Q99MS8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tpgs1Q99MS8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tpgs1Q99MS8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tpgs1Q99MS8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tpgs1Q99MS8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.87■■□□□ 1.09
Tpgs1Q99MS8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Tpgs1Q99MS8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Tpgs1Q99MS8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tpgs1Q99MS8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Tpgs1Q99MS8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Tpgs1Q99MS8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tpgs1Q99MS8 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.87■■□□□ 1.09
Tpgs1Q99MS8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tpgs1Q99MS8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.86■■□□□ 1.09
Tpgs1Q99MS8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tpgs1Q99MS8 Gm14117-201ENSMUST00000122417 843 ntBASIC21.86■■□□□ 1.09
Tpgs1Q99MS8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tpgs1Q99MS8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tpgs1Q99MS8 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.86■■□□□ 1.09
Tpgs1Q99MS8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tpgs1Q99MS8 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.85■■□□□ 1.09
Tpgs1Q99MS8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tpgs1Q99MS8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Tpgs1Q99MS8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.85■■□□□ 1.09
Tpgs1Q99MS8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.85■■□□□ 1.09
Tpgs1Q99MS8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.85■■□□□ 1.09
Tpgs1Q99MS8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Tpgs1Q99MS8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Tpgs1Q99MS8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tpgs1Q99MS8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tpgs1Q99MS8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tpgs1Q99MS8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tpgs1Q99MS8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Tpgs1Q99MS8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tpgs1Q99MS8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tpgs1Q99MS8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tpgs1Q99MS8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tpgs1Q99MS8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tpgs1Q99MS8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Tpgs1Q99MS8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Tpgs1Q99MS8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.83■■□□□ 1.08
Tpgs1Q99MS8 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.83■■□□□ 1.08
Tpgs1Q99MS8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Tpgs1Q99MS8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Tpgs1Q99MS8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tpgs1Q99MS8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tpgs1Q99MS8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tpgs1Q99MS8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.82■■□□□ 1.08
Tpgs1Q99MS8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tpgs1Q99MS8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tpgs1Q99MS8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Tpgs1Q99MS8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Tpgs1Q99MS8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tpgs1Q99MS8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Tpgs1Q99MS8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.82■■□□□ 1.08
Tpgs1Q99MS8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Tpgs1Q99MS8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tpgs1Q99MS8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.82■■□□□ 1.08
Tpgs1Q99MS8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Tpgs1Q99MS8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Tpgs1Q99MS8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tpgs1Q99MS8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Tpgs1Q99MS8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tpgs1Q99MS8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.81■■□□□ 1.08
Tpgs1Q99MS8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Tpgs1Q99MS8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms