Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scrt1Q99M85 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.3■□□□□ 0.52
Scrt1Q99M85 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scrt1Q99M85 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Scrt1Q99M85 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scrt1Q99M85 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.29■□□□□ 0.52
Scrt1Q99M85 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scrt1Q99M85 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scrt1Q99M85 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scrt1Q99M85 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scrt1Q99M85 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.29■□□□□ 0.52
Scrt1Q99M85 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scrt1Q99M85 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scrt1Q99M85 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scrt1Q99M85 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.28■□□□□ 0.52
Scrt1Q99M85 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scrt1Q99M85 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scrt1Q99M85 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scrt1Q99M85 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Scrt1Q99M85 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scrt1Q99M85 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.28■□□□□ 0.52
Scrt1Q99M85 Gm8495-201ENSMUST00000188740 694 ntBASIC18.28■□□□□ 0.52
Scrt1Q99M85 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Scrt1Q99M85 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scrt1Q99M85 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scrt1Q99M85 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scrt1Q99M85 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scrt1Q99M85 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scrt1Q99M85 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scrt1Q99M85 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.27■□□□□ 0.52
Scrt1Q99M85 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Scrt1Q99M85 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scrt1Q99M85 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.27■□□□□ 0.52
Scrt1Q99M85 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.27■□□□□ 0.52
Scrt1Q99M85 Gm29257-201ENSMUST00000186115 639 ntBASIC18.27■□□□□ 0.52
Scrt1Q99M85 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scrt1Q99M85 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scrt1Q99M85 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scrt1Q99M85 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scrt1Q99M85 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Scrt1Q99M85 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.27■□□□□ 0.51
Scrt1Q99M85 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scrt1Q99M85 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scrt1Q99M85 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scrt1Q99M85 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scrt1Q99M85 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scrt1Q99M85 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.26■□□□□ 0.51
Scrt1Q99M85 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scrt1Q99M85 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scrt1Q99M85 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.25■□□□□ 0.51
Scrt1Q99M85 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scrt1Q99M85 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scrt1Q99M85 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Scrt1Q99M85 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.25■□□□□ 0.51
Scrt1Q99M85 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.25■□□□□ 0.51
Scrt1Q99M85 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scrt1Q99M85 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
Scrt1Q99M85 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scrt1Q99M85 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scrt1Q99M85 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Scrt1Q99M85 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scrt1Q99M85 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scrt1Q99M85 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scrt1Q99M85 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.24■□□□□ 0.51
Scrt1Q99M85 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scrt1Q99M85 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.24■□□□□ 0.51
Scrt1Q99M85 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scrt1Q99M85 Gm18284-201ENSMUST00000172604 624 ntBASIC18.24■□□□□ 0.51
Scrt1Q99M85 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scrt1Q99M85 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scrt1Q99M85 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
Scrt1Q99M85 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scrt1Q99M85 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scrt1Q99M85 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scrt1Q99M85 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scrt1Q99M85 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scrt1Q99M85 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scrt1Q99M85 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Scrt1Q99M85 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scrt1Q99M85 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scrt1Q99M85 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scrt1Q99M85 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Scrt1Q99M85 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scrt1Q99M85 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scrt1Q99M85 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scrt1Q99M85 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Scrt1Q99M85 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scrt1Q99M85 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scrt1Q99M85 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scrt1Q99M85 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scrt1Q99M85 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scrt1Q99M85 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
Scrt1Q99M85 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
Scrt1Q99M85 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Scrt1Q99M85 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scrt1Q99M85 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.21■□□□□ 0.51
Scrt1Q99M85 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Scrt1Q99M85 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scrt1Q99M85 Notumos-201ENSMUST00000151998 2659 ntBASIC18.21■□□□□ 0.51
Scrt1Q99M85 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 154.2 ms