Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nck1Q99M51 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nck1Q99M51 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nck1Q99M51 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nck1Q99M51 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.89■□□□□ 0.77
Nck1Q99M51 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.89■□□□□ 0.77
Nck1Q99M51 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nck1Q99M51 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nck1Q99M51 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nck1Q99M51 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.88■□□□□ 0.77
Nck1Q99M51 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nck1Q99M51 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nck1Q99M51 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nck1Q99M51 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nck1Q99M51 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nck1Q99M51 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nck1Q99M51 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nck1Q99M51 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nck1Q99M51 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nck1Q99M51 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nck1Q99M51 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Nck1Q99M51 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nck1Q99M51 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nck1Q99M51 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.86■□□□□ 0.77
Nck1Q99M51 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Nck1Q99M51 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nck1Q99M51 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nck1Q99M51 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nck1Q99M51 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nck1Q99M51 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Nck1Q99M51 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nck1Q99M51 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nck1Q99M51 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nck1Q99M51 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nck1Q99M51 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nck1Q99M51 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nck1Q99M51 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Nck1Q99M51 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Nck1Q99M51 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nck1Q99M51 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nck1Q99M51 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Nck1Q99M51 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nck1Q99M51 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nck1Q99M51 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nck1Q99M51 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
Nck1Q99M51 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nck1Q99M51 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nck1Q99M51 Scarna2-201ENSMUST00000157560 414 ntBASIC19.83■□□□□ 0.77
Nck1Q99M51 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nck1Q99M51 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.83■□□□□ 0.76
Nck1Q99M51 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nck1Q99M51 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nck1Q99M51 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nck1Q99M51 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nck1Q99M51 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Nck1Q99M51 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nck1Q99M51 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nck1Q99M51 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nck1Q99M51 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nck1Q99M51 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.82■□□□□ 0.76
Nck1Q99M51 Gm16437-201ENSMUST00000025669 507 ntBASIC19.82■□□□□ 0.76
Nck1Q99M51 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nck1Q99M51 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.82■□□□□ 0.76
Nck1Q99M51 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nck1Q99M51 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nck1Q99M51 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nck1Q99M51 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nck1Q99M51 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.81■□□□□ 0.76
Nck1Q99M51 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.81■□□□□ 0.76
Nck1Q99M51 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nck1Q99M51 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nck1Q99M51 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Nck1Q99M51 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nck1Q99M51 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.8■□□□□ 0.76
Nck1Q99M51 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Nck1Q99M51 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nck1Q99M51 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nck1Q99M51 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.8■□□□□ 0.76
Nck1Q99M51 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.8■□□□□ 0.76
Nck1Q99M51 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Nck1Q99M51 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nck1Q99M51 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.8■□□□□ 0.76
Nck1Q99M51 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Nck1Q99M51 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nck1Q99M51 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nck1Q99M51 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nck1Q99M51 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nck1Q99M51 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Nck1Q99M51 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nck1Q99M51 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nck1Q99M51 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Nck1Q99M51 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.79■□□□□ 0.76
Nck1Q99M51 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nck1Q99M51 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nck1Q99M51 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.79■□□□□ 0.76
Nck1Q99M51 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nck1Q99M51 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nck1Q99M51 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nck1Q99M51 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nck1Q99M51 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms