Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.52■■□□□ 1.52
SMOQ99835 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
SMOQ99835 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.52■■□□□ 1.52
SMOQ99835 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.52■■□□□ 1.52
SMOQ99835 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SMOQ99835 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SMOQ99835 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.52■■□□□ 1.52
SMOQ99835 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.52■■□□□ 1.52
SMOQ99835 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SMOQ99835 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
SMOQ99835 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SMOQ99835 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMOQ99835 AC138932.3-201ENST00000567634 1902 ntBASIC24.51■■□□□ 1.51
SMOQ99835 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMOQ99835 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMOQ99835 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMOQ99835 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.51■■□□□ 1.51
SMOQ99835 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.51■■□□□ 1.51
SMOQ99835 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.51■■□□□ 1.51
SMOQ99835 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.5■■□□□ 1.51
SMOQ99835 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SMOQ99835 AC142381.3-201ENST00000568208 1670 ntBASIC24.5■■□□□ 1.51
SMOQ99835 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SMOQ99835 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SMOQ99835 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SMOQ99835 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SMOQ99835 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SMOQ99835 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.49■■□□□ 1.51
SMOQ99835 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SMOQ99835 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.49■■□□□ 1.51
SMOQ99835 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.49■■□□□ 1.51
SMOQ99835 TSPY9P-201ENST00000440215 945 ntBASIC24.49■■□□□ 1.51
SMOQ99835 TSPY11P-201ENST00000442607 1045 ntBASIC24.49■■□□□ 1.51
SMOQ99835 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
SMOQ99835 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SMOQ99835 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SMOQ99835 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SMOQ99835 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SMOQ99835 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.48■■□□□ 1.51
SMOQ99835 AL356441.2-201ENST00000443009 864 ntBASIC24.48■■□□□ 1.51
SMOQ99835 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.48■■□□□ 1.51
SMOQ99835 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.48■■□□□ 1.51
SMOQ99835 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
SMOQ99835 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SMOQ99835 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SMOQ99835 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SMOQ99835 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SMOQ99835 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.47■■□□□ 1.51
SMOQ99835 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SMOQ99835 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.47■■□□□ 1.51
SMOQ99835 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.47■■□□□ 1.51
SMOQ99835 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
SMOQ99835 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SMOQ99835 HLA-L-211ENST00000482052 1765 ntBASIC24.47■■□□□ 1.51
SMOQ99835 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.46■■□□□ 1.51
SMOQ99835 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SMOQ99835 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.46■■□□□ 1.51
SMOQ99835 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.46■■□□□ 1.51
SMOQ99835 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
SMOQ99835 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.46■■□□□ 1.51
SMOQ99835 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.46■■□□□ 1.51
SMOQ99835 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.46■■□□□ 1.51
SMOQ99835 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.46■■□□□ 1.51
SMOQ99835 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SMOQ99835 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.51
SMOQ99835 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMOQ99835 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMOQ99835 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.45■■□□□ 1.5
SMOQ99835 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.45■■□□□ 1.5
SMOQ99835 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.45■■□□□ 1.5
SMOQ99835 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SMOQ99835 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.45■■□□□ 1.5
SMOQ99835 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SMOQ99835 AP003733.4-201ENST00000623785 1697 ntBASIC24.45■■□□□ 1.5
SMOQ99835 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SMOQ99835 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMOQ99835 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
SMOQ99835 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.44■■□□□ 1.5
SMOQ99835 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SMOQ99835 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
SMOQ99835 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.44■■□□□ 1.5
SMOQ99835 SNX5-217ENST00000606557 1087 ntBASIC24.44■■□□□ 1.5
SMOQ99835 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SMOQ99835 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
SMOQ99835 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SMOQ99835 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.44■■□□□ 1.5
SMOQ99835 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SMOQ99835 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.43■■□□□ 1.5
SMOQ99835 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SMOQ99835 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.43■■□□□ 1.5
SMOQ99835 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.43■■□□□ 1.5
SMOQ99835 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.43■■□□□ 1.5
SMOQ99835 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.43■■□□□ 1.5
SMOQ99835 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.43■■□□□ 1.5
SMOQ99835 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SMOQ99835 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
SMOQ99835 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
SMOQ99835 AC131274.2-201ENST00000580697 1507 ntBASIC24.42■■□□□ 1.5
SMOQ99835 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.42■■□□□ 1.5
SMOQ99835 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms