Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
H1fooQ8VIK3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
H1fooQ8VIK3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
H1fooQ8VIK3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
H1fooQ8VIK3 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.45■□□□□ 0.38
H1fooQ8VIK3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
H1fooQ8VIK3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H1fooQ8VIK3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H1fooQ8VIK3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
H1fooQ8VIK3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H1fooQ8VIK3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H1fooQ8VIK3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
H1fooQ8VIK3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H1fooQ8VIK3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
H1fooQ8VIK3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
H1fooQ8VIK3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
H1fooQ8VIK3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
H1fooQ8VIK3 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.44■□□□□ 0.38
H1fooQ8VIK3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
H1fooQ8VIK3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
H1fooQ8VIK3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
H1fooQ8VIK3 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.43■□□□□ 0.38
H1fooQ8VIK3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
H1fooQ8VIK3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.43■□□□□ 0.38
H1fooQ8VIK3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
H1fooQ8VIK3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.43■□□□□ 0.38
H1fooQ8VIK3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H1fooQ8VIK3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H1fooQ8VIK3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
H1fooQ8VIK3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
H1fooQ8VIK3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
H1fooQ8VIK3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
H1fooQ8VIK3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
H1fooQ8VIK3 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.42■□□□□ 0.38
H1fooQ8VIK3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H1fooQ8VIK3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H1fooQ8VIK3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.41■□□□□ 0.38
H1fooQ8VIK3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
H1fooQ8VIK3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.41■□□□□ 0.38
H1fooQ8VIK3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
H1fooQ8VIK3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H1fooQ8VIK3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H1fooQ8VIK3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H1fooQ8VIK3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H1fooQ8VIK3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
H1fooQ8VIK3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
H1fooQ8VIK3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H1fooQ8VIK3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H1fooQ8VIK3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H1fooQ8VIK3 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.4■□□□□ 0.38
H1fooQ8VIK3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.4■□□□□ 0.38
H1fooQ8VIK3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H1fooQ8VIK3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H1fooQ8VIK3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
H1fooQ8VIK3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
H1fooQ8VIK3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.39■□□□□ 0.37
H1fooQ8VIK3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
H1fooQ8VIK3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.39■□□□□ 0.37
H1fooQ8VIK3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H1fooQ8VIK3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
H1fooQ8VIK3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.38■□□□□ 0.37
H1fooQ8VIK3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms