Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
FNDC9Q8TBE3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FNDC9Q8TBE3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.84■□□□□ 0.93
FNDC9Q8TBE3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
FNDC9Q8TBE3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FNDC9Q8TBE3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.84■□□□□ 0.93
FNDC9Q8TBE3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FNDC9Q8TBE3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FNDC9Q8TBE3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FNDC9Q8TBE3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
FNDC9Q8TBE3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FNDC9Q8TBE3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
FNDC9Q8TBE3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
FNDC9Q8TBE3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
FNDC9Q8TBE3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.83■□□□□ 0.93
FNDC9Q8TBE3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
FNDC9Q8TBE3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.83■□□□□ 0.93
FNDC9Q8TBE3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
FNDC9Q8TBE3 AL356441.2-201ENST00000443009 864 ntBASIC20.83■□□□□ 0.93
FNDC9Q8TBE3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
FNDC9Q8TBE3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
FNDC9Q8TBE3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
FNDC9Q8TBE3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
FNDC9Q8TBE3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.83■□□□□ 0.92
FNDC9Q8TBE3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
FNDC9Q8TBE3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FNDC9Q8TBE3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
FNDC9Q8TBE3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FNDC9Q8TBE3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.82■□□□□ 0.92
FNDC9Q8TBE3 TSPY9P-201ENST00000440215 945 ntBASIC20.82■□□□□ 0.92
FNDC9Q8TBE3 TSPY11P-201ENST00000442607 1045 ntBASIC20.82■□□□□ 0.92
FNDC9Q8TBE3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
FNDC9Q8TBE3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.82■□□□□ 0.92
FNDC9Q8TBE3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
FNDC9Q8TBE3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FNDC9Q8TBE3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FNDC9Q8TBE3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
FNDC9Q8TBE3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FNDC9Q8TBE3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FNDC9Q8TBE3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FNDC9Q8TBE3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.81■□□□□ 0.92
FNDC9Q8TBE3 UNC93B8-201ENST00000511903 705 ntBASIC20.81■□□□□ 0.92
FNDC9Q8TBE3 AC092028.1-203ENST00000608262 953 ntBASIC20.81■□□□□ 0.92
FNDC9Q8TBE3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.81■□□□□ 0.92
FNDC9Q8TBE3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FNDC9Q8TBE3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FNDC9Q8TBE3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
FNDC9Q8TBE3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.8■□□□□ 0.92
FNDC9Q8TBE3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FNDC9Q8TBE3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FNDC9Q8TBE3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FNDC9Q8TBE3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FNDC9Q8TBE3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
FNDC9Q8TBE3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.8■□□□□ 0.92
FNDC9Q8TBE3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FNDC9Q8TBE3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FNDC9Q8TBE3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FNDC9Q8TBE3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
FNDC9Q8TBE3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.79■□□□□ 0.92
FNDC9Q8TBE3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.79■□□□□ 0.92
FNDC9Q8TBE3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
FNDC9Q8TBE3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.79■□□□□ 0.92
FNDC9Q8TBE3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.79■□□□□ 0.92
FNDC9Q8TBE3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.79■□□□□ 0.92
FNDC9Q8TBE3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
FNDC9Q8TBE3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
FNDC9Q8TBE3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.78■□□□□ 0.92
FNDC9Q8TBE3 AC020928.2-201ENST00000588717 2197 ntBASIC20.78■□□□□ 0.92
FNDC9Q8TBE3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FNDC9Q8TBE3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.78■□□□□ 0.92
FNDC9Q8TBE3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
FNDC9Q8TBE3 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.78■□□□□ 0.92
FNDC9Q8TBE3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
FNDC9Q8TBE3 MIR6089-201ENST00000616698 64 ntBASIC20.78■□□□□ 0.92
FNDC9Q8TBE3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
FNDC9Q8TBE3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FNDC9Q8TBE3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FNDC9Q8TBE3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
FNDC9Q8TBE3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FNDC9Q8TBE3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FNDC9Q8TBE3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.77■□□□□ 0.92
FNDC9Q8TBE3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FNDC9Q8TBE3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
FNDC9Q8TBE3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.77■□□□□ 0.92
FNDC9Q8TBE3 AC131212.1-201ENST00000613771 668 ntBASIC20.77■□□□□ 0.92
FNDC9Q8TBE3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FNDC9Q8TBE3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FNDC9Q8TBE3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
FNDC9Q8TBE3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FNDC9Q8TBE3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
FNDC9Q8TBE3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FNDC9Q8TBE3 KRT16P3-201ENST00000439127 1283 ntBASIC20.76■□□□□ 0.91
FNDC9Q8TBE3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.76■□□□□ 0.91
FNDC9Q8TBE3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.76■□□□□ 0.91
FNDC9Q8TBE3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FNDC9Q8TBE3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FNDC9Q8TBE3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FNDC9Q8TBE3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FNDC9Q8TBE3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.75■□□□□ 0.91
FNDC9Q8TBE3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms