Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Mir6538-201ENSMUST00000183713 110 ntBASIC19.33■□□□□ 0.68
H2afjQ8R1M2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
H2afjQ8R1M2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
H2afjQ8R1M2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
H2afjQ8R1M2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
H2afjQ8R1M2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
H2afjQ8R1M2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
H2afjQ8R1M2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
H2afjQ8R1M2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
H2afjQ8R1M2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
H2afjQ8R1M2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
H2afjQ8R1M2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
H2afjQ8R1M2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
H2afjQ8R1M2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
H2afjQ8R1M2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
H2afjQ8R1M2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
H2afjQ8R1M2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
H2afjQ8R1M2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
H2afjQ8R1M2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.31■□□□□ 0.68
H2afjQ8R1M2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
H2afjQ8R1M2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
H2afjQ8R1M2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
H2afjQ8R1M2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H2afjQ8R1M2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
H2afjQ8R1M2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.3■□□□□ 0.68
H2afjQ8R1M2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
H2afjQ8R1M2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
H2afjQ8R1M2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
H2afjQ8R1M2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
H2afjQ8R1M2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H2afjQ8R1M2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2afjQ8R1M2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2afjQ8R1M2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
H2afjQ8R1M2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2afjQ8R1M2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2afjQ8R1M2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2afjQ8R1M2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2afjQ8R1M2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afjQ8R1M2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afjQ8R1M2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afjQ8R1M2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afjQ8R1M2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afjQ8R1M2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afjQ8R1M2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.28■□□□□ 0.68
H2afjQ8R1M2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afjQ8R1M2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
H2afjQ8R1M2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afjQ8R1M2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afjQ8R1M2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afjQ8R1M2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
H2afjQ8R1M2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
H2afjQ8R1M2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
H2afjQ8R1M2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
H2afjQ8R1M2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
H2afjQ8R1M2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
H2afjQ8R1M2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
H2afjQ8R1M2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
H2afjQ8R1M2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
H2afjQ8R1M2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
H2afjQ8R1M2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
H2afjQ8R1M2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
H2afjQ8R1M2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
H2afjQ8R1M2 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.26■□□□□ 0.67
H2afjQ8R1M2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
H2afjQ8R1M2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H2afjQ8R1M2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H2afjQ8R1M2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
H2afjQ8R1M2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
H2afjQ8R1M2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
H2afjQ8R1M2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H2afjQ8R1M2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.25■□□□□ 0.67
H2afjQ8R1M2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
H2afjQ8R1M2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.25■□□□□ 0.67
H2afjQ8R1M2 Gm12366-201ENSMUST00000121722 873 ntBASIC19.25■□□□□ 0.67
H2afjQ8R1M2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.25■□□□□ 0.67
H2afjQ8R1M2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.25■□□□□ 0.67
H2afjQ8R1M2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.25■□□□□ 0.67
H2afjQ8R1M2 Gm5786-201ENSMUST00000085368 882 ntBASIC19.25■□□□□ 0.67
H2afjQ8R1M2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
H2afjQ8R1M2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
H2afjQ8R1M2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
H2afjQ8R1M2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
H2afjQ8R1M2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
H2afjQ8R1M2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
H2afjQ8R1M2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
H2afjQ8R1M2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
H2afjQ8R1M2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
H2afjQ8R1M2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
H2afjQ8R1M2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.24■□□□□ 0.67
H2afjQ8R1M2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
H2afjQ8R1M2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.24■□□□□ 0.67
H2afjQ8R1M2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
H2afjQ8R1M2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
H2afjQ8R1M2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
H2afjQ8R1M2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
H2afjQ8R1M2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
H2afjQ8R1M2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afjQ8R1M2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afjQ8R1M2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afjQ8R1M2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms