Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pdlim2Q8R1G6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pdlim2Q8R1G6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pdlim2Q8R1G6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pdlim2Q8R1G6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Pdlim2Q8R1G6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pdlim2Q8R1G6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pdlim2Q8R1G6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Pdlim2Q8R1G6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Pdlim2Q8R1G6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pdlim2Q8R1G6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Pdlim2Q8R1G6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pdlim2Q8R1G6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pdlim2Q8R1G6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pdlim2Q8R1G6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Pdlim2Q8R1G6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pdlim2Q8R1G6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC24.22■■□□□ 1.47
Pdlim2Q8R1G6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pdlim2Q8R1G6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pdlim2Q8R1G6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Pdlim2Q8R1G6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pdlim2Q8R1G6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pdlim2Q8R1G6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pdlim2Q8R1G6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pdlim2Q8R1G6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC24.2■■□□□ 1.47
Pdlim2Q8R1G6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pdlim2Q8R1G6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC24.2■■□□□ 1.46
Pdlim2Q8R1G6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pdlim2Q8R1G6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pdlim2Q8R1G6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pdlim2Q8R1G6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Pdlim2Q8R1G6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pdlim2Q8R1G6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pdlim2Q8R1G6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pdlim2Q8R1G6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pdlim2Q8R1G6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pdlim2Q8R1G6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pdlim2Q8R1G6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pdlim2Q8R1G6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pdlim2Q8R1G6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pdlim2Q8R1G6 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.17■■□□□ 1.46
Pdlim2Q8R1G6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.17■■□□□ 1.46
Pdlim2Q8R1G6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pdlim2Q8R1G6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Pdlim2Q8R1G6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pdlim2Q8R1G6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pdlim2Q8R1G6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.16■■□□□ 1.46
Pdlim2Q8R1G6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pdlim2Q8R1G6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pdlim2Q8R1G6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pdlim2Q8R1G6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pdlim2Q8R1G6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pdlim2Q8R1G6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Pdlim2Q8R1G6 Gm5913-201ENSMUST00000119397 1399 ntBASIC24.15■■□□□ 1.46
Pdlim2Q8R1G6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.46
Pdlim2Q8R1G6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Pdlim2Q8R1G6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pdlim2Q8R1G6 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.14■■□□□ 1.45
Pdlim2Q8R1G6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pdlim2Q8R1G6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pdlim2Q8R1G6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pdlim2Q8R1G6 Gm37035-201ENSMUST00000194809 2148 ntBASIC24.13■■□□□ 1.45
Pdlim2Q8R1G6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Pdlim2Q8R1G6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
Pdlim2Q8R1G6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pdlim2Q8R1G6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC24.12■■□□□ 1.45
Pdlim2Q8R1G6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pdlim2Q8R1G6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pdlim2Q8R1G6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pdlim2Q8R1G6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pdlim2Q8R1G6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Pdlim2Q8R1G6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Pdlim2Q8R1G6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Pdlim2Q8R1G6 Nkain2-201ENSMUST00000092602 558 ntBASIC24.11■■□□□ 1.45
Pdlim2Q8R1G6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC24.11■■□□□ 1.45
Pdlim2Q8R1G6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pdlim2Q8R1G6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pdlim2Q8R1G6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pdlim2Q8R1G6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pdlim2Q8R1G6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pdlim2Q8R1G6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pdlim2Q8R1G6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pdlim2Q8R1G6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pdlim2Q8R1G6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Pdlim2Q8R1G6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Pdlim2Q8R1G6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pdlim2Q8R1G6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pdlim2Q8R1G6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pdlim2Q8R1G6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Pdlim2Q8R1G6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pdlim2Q8R1G6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC24.09■■□□□ 1.45
Pdlim2Q8R1G6 Gm9812-201ENSMUST00000061934 968 ntBASIC24.09■■□□□ 1.45
Pdlim2Q8R1G6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Pdlim2Q8R1G6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pdlim2Q8R1G6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pdlim2Q8R1G6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Pdlim2Q8R1G6 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.08■■□□□ 1.45
Pdlim2Q8R1G6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Pdlim2Q8R1G6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Pdlim2Q8R1G6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms