Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rpp40Q8R1F9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rpp40Q8R1F9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.53■■□□□ 1.2
Rpp40Q8R1F9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rpp40Q8R1F9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Rpp40Q8R1F9 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.53■■□□□ 1.2
Rpp40Q8R1F9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rpp40Q8R1F9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rpp40Q8R1F9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rpp40Q8R1F9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rpp40Q8R1F9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.52■■□□□ 1.2
Rpp40Q8R1F9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC22.52■■□□□ 1.2
Rpp40Q8R1F9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rpp40Q8R1F9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Rpp40Q8R1F9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rpp40Q8R1F9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rpp40Q8R1F9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rpp40Q8R1F9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
Rpp40Q8R1F9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rpp40Q8R1F9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rpp40Q8R1F9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.51■■□□□ 1.19
Rpp40Q8R1F9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rpp40Q8R1F9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rpp40Q8R1F9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rpp40Q8R1F9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rpp40Q8R1F9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rpp40Q8R1F9 Gm22238-201ENSMUST00000175222 88 ntBASIC22.5■■□□□ 1.19
Rpp40Q8R1F9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.5■■□□□ 1.19
Rpp40Q8R1F9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
Rpp40Q8R1F9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rpp40Q8R1F9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rpp40Q8R1F9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rpp40Q8R1F9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rpp40Q8R1F9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.49■■□□□ 1.19
Rpp40Q8R1F9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rpp40Q8R1F9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rpp40Q8R1F9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rpp40Q8R1F9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rpp40Q8R1F9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Rpp40Q8R1F9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rpp40Q8R1F9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Rpp40Q8R1F9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.48■■□□□ 1.19
Rpp40Q8R1F9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Rpp40Q8R1F9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.48■■□□□ 1.19
Rpp40Q8R1F9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rpp40Q8R1F9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rpp40Q8R1F9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rpp40Q8R1F9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rpp40Q8R1F9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rpp40Q8R1F9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rpp40Q8R1F9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rpp40Q8R1F9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rpp40Q8R1F9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Rpp40Q8R1F9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Rpp40Q8R1F9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.45■■□□□ 1.18
Rpp40Q8R1F9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.45■■□□□ 1.18
Rpp40Q8R1F9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rpp40Q8R1F9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rpp40Q8R1F9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Rpp40Q8R1F9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rpp40Q8R1F9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.45■■□□□ 1.18
Rpp40Q8R1F9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rpp40Q8R1F9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rpp40Q8R1F9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rpp40Q8R1F9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rpp40Q8R1F9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.43■■□□□ 1.18
Rpp40Q8R1F9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rpp40Q8R1F9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rpp40Q8R1F9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Rpp40Q8R1F9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rpp40Q8R1F9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rpp40Q8R1F9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rpp40Q8R1F9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpp40Q8R1F9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
Rpp40Q8R1F9 Gm4430-201ENSMUST00000192413 1943 ntBASIC22.42■■□□□ 1.18
Rpp40Q8R1F9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpp40Q8R1F9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Rpp40Q8R1F9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpp40Q8R1F9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpp40Q8R1F9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpp40Q8R1F9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Rpp40Q8R1F9 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.41■■□□□ 1.18
Rpp40Q8R1F9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Rpp40Q8R1F9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rpp40Q8R1F9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rpp40Q8R1F9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC22.4■■□□□ 1.18
Rpp40Q8R1F9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Rpp40Q8R1F9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Rpp40Q8R1F9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rpp40Q8R1F9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rpp40Q8R1F9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rpp40Q8R1F9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Rpp40Q8R1F9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Rpp40Q8R1F9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Rpp40Q8R1F9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rpp40Q8R1F9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.39■■□□□ 1.17
Rpp40Q8R1F9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Rpp40Q8R1F9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rpp40Q8R1F9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rpp40Q8R1F9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms