Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SETD9Q8NE22 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SETD9Q8NE22 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SETD9Q8NE22 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.24■□□□□ 0.99
SETD9Q8NE22 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SETD9Q8NE22 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SETD9Q8NE22 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SETD9Q8NE22 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SETD9Q8NE22 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SETD9Q8NE22 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SETD9Q8NE22 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.24■□□□□ 0.99
SETD9Q8NE22 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SETD9Q8NE22 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SETD9Q8NE22 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.23■□□□□ 0.99
SETD9Q8NE22 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SETD9Q8NE22 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SETD9Q8NE22 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
SETD9Q8NE22 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SETD9Q8NE22 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SETD9Q8NE22 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SETD9Q8NE22 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
SETD9Q8NE22 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SETD9Q8NE22 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SETD9Q8NE22 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SETD9Q8NE22 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SETD9Q8NE22 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SETD9Q8NE22 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SETD9Q8NE22 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SETD9Q8NE22 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SETD9Q8NE22 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SETD9Q8NE22 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SETD9Q8NE22 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
SETD9Q8NE22 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SETD9Q8NE22 LINC00565-201ENST00000562710 2331 ntBASIC21.22■□□□□ 0.99
SETD9Q8NE22 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SETD9Q8NE22 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SETD9Q8NE22 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
SETD9Q8NE22 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SETD9Q8NE22 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SETD9Q8NE22 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SETD9Q8NE22 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SETD9Q8NE22 AC126177.7-201ENST00000547904 679 ntBASIC21.21■□□□□ 0.99
SETD9Q8NE22 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.21■□□□□ 0.99
SETD9Q8NE22 EP400NL-214ENST00000641289 2402 ntBASIC21.21■□□□□ 0.99
SETD9Q8NE22 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SETD9Q8NE22 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SETD9Q8NE22 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SETD9Q8NE22 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SETD9Q8NE22 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SETD9Q8NE22 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.2■□□□□ 0.98
SETD9Q8NE22 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SETD9Q8NE22 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.2■□□□□ 0.98
SETD9Q8NE22 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SETD9Q8NE22 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.2■□□□□ 0.98
SETD9Q8NE22 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.2■□□□□ 0.98
SETD9Q8NE22 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.2■□□□□ 0.98
SETD9Q8NE22 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SETD9Q8NE22 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SETD9Q8NE22 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SETD9Q8NE22 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SETD9Q8NE22 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SETD9Q8NE22 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SETD9Q8NE22 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SETD9Q8NE22 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SETD9Q8NE22 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SETD9Q8NE22 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.19■□□□□ 0.98
SETD9Q8NE22 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SETD9Q8NE22 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SETD9Q8NE22 DUX4L13-201ENST00000554103 1267 ntBASIC21.19■□□□□ 0.98
SETD9Q8NE22 DUX4L15-201ENST00000611059 1267 ntBASIC21.19■□□□□ 0.98
SETD9Q8NE22 DUX4L23-201ENST00000615195 1269 ntBASIC21.19■□□□□ 0.98
SETD9Q8NE22 DUX4L24-201ENST00000617576 1269 ntBASIC21.19■□□□□ 0.98
SETD9Q8NE22 DUX4L22-201ENST00000618238 1269 ntBASIC21.19■□□□□ 0.98
SETD9Q8NE22 DUX4L20-201ENST00000619712 1269 ntBASIC21.19■□□□□ 0.98
SETD9Q8NE22 DUX4L21-201ENST00000622058 1269 ntBASIC21.19■□□□□ 0.98
SETD9Q8NE22 DUX4L10-201ENST00000622460 1267 ntBASIC21.19■□□□□ 0.98
SETD9Q8NE22 DUX4L25-201ENST00000624915 1269 ntBASIC21.19■□□□□ 0.98
SETD9Q8NE22 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SETD9Q8NE22 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SETD9Q8NE22 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SETD9Q8NE22 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SETD9Q8NE22 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SETD9Q8NE22 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SETD9Q8NE22 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
SETD9Q8NE22 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SETD9Q8NE22 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.18■□□□□ 0.98
SETD9Q8NE22 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SETD9Q8NE22 LINC01971-201ENST00000617888 1048 ntBASIC21.18■□□□□ 0.98
SETD9Q8NE22 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.18■□□□□ 0.98
SETD9Q8NE22 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SETD9Q8NE22 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SETD9Q8NE22 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SETD9Q8NE22 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SETD9Q8NE22 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.17■□□□□ 0.98
SETD9Q8NE22 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SETD9Q8NE22 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.17■□□□□ 0.98
SETD9Q8NE22 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SETD9Q8NE22 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.17■□□□□ 0.98
SETD9Q8NE22 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SETD9Q8NE22 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms