Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01561Q8N1V8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
LINC01561Q8N1V8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01561Q8N1V8 AC079834.2-201ENST00000609776 1949 ntBASIC15.55■□□□□ 0.08
LINC01561Q8N1V8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC15.55■□□□□ 0.08
LINC01561Q8N1V8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01561Q8N1V8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01561Q8N1V8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01561Q8N1V8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01561Q8N1V8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01561Q8N1V8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC15.55■□□□□ 0.08
LINC01561Q8N1V8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC15.55■□□□□ 0.08
LINC01561Q8N1V8 AC007029.1-201ENST00000604183 313 ntBASIC15.55■□□□□ 0.08
LINC01561Q8N1V8 ABCB10P4-201ENST00000566803 2184 ntBASIC15.55■□□□□ 0.08
LINC01561Q8N1V8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC01561Q8N1V8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01561Q8N1V8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC15.54■□□□□ 0.08
LINC01561Q8N1V8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01561Q8N1V8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC01561Q8N1V8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01561Q8N1V8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01561Q8N1V8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01561Q8N1V8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01561Q8N1V8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01561Q8N1V8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01561Q8N1V8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LINC01561Q8N1V8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC15.53■□□□□ 0.08
LINC01561Q8N1V8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
LINC01561Q8N1V8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC15.53■□□□□ 0.08
LINC01561Q8N1V8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01561Q8N1V8 RAP2CP1-202ENST00000605179 643 ntBASIC15.53■□□□□ 0.08
LINC01561Q8N1V8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01561Q8N1V8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01561Q8N1V8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01561Q8N1V8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC15.53■□□□□ 0.08
LINC01561Q8N1V8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01561Q8N1V8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC01561Q8N1V8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LINC01561Q8N1V8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01561Q8N1V8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC15.52■□□□□ 0.08
LINC01561Q8N1V8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01561Q8N1V8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01561Q8N1V8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01561Q8N1V8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01561Q8N1V8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01561Q8N1V8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
LINC01561Q8N1V8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
LINC01561Q8N1V8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
LINC01561Q8N1V8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
LINC01561Q8N1V8 NFE2L3P1-201ENST00000588207 1959 ntBASIC15.52■□□□□ 0.07
LINC01561Q8N1V8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINC01561Q8N1V8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINC01561Q8N1V8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LINC01561Q8N1V8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
LINC01561Q8N1V8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINC01561Q8N1V8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC15.52■□□□□ 0.07
LINC01561Q8N1V8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01561Q8N1V8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LINC01561Q8N1V8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01561Q8N1V8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01561Q8N1V8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC15.51■□□□□ 0.07
LINC01561Q8N1V8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC15.51■□□□□ 0.07
LINC01561Q8N1V8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
LINC01561Q8N1V8 AC022413.1-201ENST00000624602 984 ntBASIC15.51■□□□□ 0.07
LINC01561Q8N1V8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01561Q8N1V8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01561Q8N1V8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC15.51■□□□□ 0.07
LINC01561Q8N1V8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01561Q8N1V8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01561Q8N1V8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01561Q8N1V8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01561Q8N1V8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01561Q8N1V8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC15.5■□□□□ 0.07
LINC01561Q8N1V8 AC026202.3-201ENST00000600805 1127 ntBASIC15.5■□□□□ 0.07
LINC01561Q8N1V8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01561Q8N1V8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC15.5■□□□□ 0.07
LINC01561Q8N1V8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC15.5■□□□□ 0.07
LINC01561Q8N1V8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01561Q8N1V8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC15.5■□□□□ 0.07
LINC01561Q8N1V8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01561Q8N1V8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC15.49■□□□□ 0.07
LINC01561Q8N1V8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01561Q8N1V8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01561Q8N1V8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01561Q8N1V8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01561Q8N1V8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC15.49■□□□□ 0.07
LINC01561Q8N1V8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC15.49■□□□□ 0.07
LINC01561Q8N1V8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01561Q8N1V8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01561Q8N1V8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01561Q8N1V8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01561Q8N1V8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC15.48■□□□□ 0.07
LINC01561Q8N1V8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01561Q8N1V8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01561Q8N1V8 MIR639-201ENST00000384974 98 ntBASIC15.48■□□□□ 0.07
LINC01561Q8N1V8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01561Q8N1V8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01561Q8N1V8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC15.48■□□□□ 0.07
LINC01561Q8N1V8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01561Q8N1V8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms