Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AC141586.4-201ENST00000624558 1573 ntBASIC22.38■■□□□ 1.17
KRT78Q8N1N4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.38■■□□□ 1.17
KRT78Q8N1N4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
KRT78Q8N1N4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
KRT78Q8N1N4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
KRT78Q8N1N4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
KRT78Q8N1N4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
KRT78Q8N1N4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
KRT78Q8N1N4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KRT78Q8N1N4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
KRT78Q8N1N4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.36■■□□□ 1.17
KRT78Q8N1N4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KRT78Q8N1N4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.36■■□□□ 1.17
KRT78Q8N1N4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
KRT78Q8N1N4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.36■■□□□ 1.17
KRT78Q8N1N4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
KRT78Q8N1N4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
KRT78Q8N1N4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.36■■□□□ 1.17
KRT78Q8N1N4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KRT78Q8N1N4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
KRT78Q8N1N4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KRT78Q8N1N4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
KRT78Q8N1N4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KRT78Q8N1N4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KRT78Q8N1N4 MIR4508-201ENST00000584178 70 ntBASIC22.35■■□□□ 1.17
KRT78Q8N1N4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
KRT78Q8N1N4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KRT78Q8N1N4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.35■■□□□ 1.17
KRT78Q8N1N4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.35■■□□□ 1.17
KRT78Q8N1N4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KRT78Q8N1N4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.34■■□□□ 1.17
KRT78Q8N1N4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
KRT78Q8N1N4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
KRT78Q8N1N4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KRT78Q8N1N4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KRT78Q8N1N4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KRT78Q8N1N4 LINC00543-201ENST00000567234 1845 ntBASIC22.34■■□□□ 1.17
KRT78Q8N1N4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
KRT78Q8N1N4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KRT78Q8N1N4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
KRT78Q8N1N4 KRT18P24-201ENST00000344739 1156 ntBASIC22.33■■□□□ 1.17
KRT78Q8N1N4 YBX1P4-201ENST00000392794 808 ntBASIC22.33■■□□□ 1.17
KRT78Q8N1N4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.33■■□□□ 1.17
KRT78Q8N1N4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KRT78Q8N1N4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
KRT78Q8N1N4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.32■■□□□ 1.16
KRT78Q8N1N4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KRT78Q8N1N4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
KRT78Q8N1N4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
KRT78Q8N1N4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.32■■□□□ 1.16
KRT78Q8N1N4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
KRT78Q8N1N4 AC120024.1-201ENST00000562672 995 ntBASIC22.32■■□□□ 1.16
KRT78Q8N1N4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.32■■□□□ 1.16
KRT78Q8N1N4 THA1P-201ENST00000590384 1145 ntBASIC22.32■■□□□ 1.16
KRT78Q8N1N4 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.32■■□□□ 1.16
KRT78Q8N1N4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.32■■□□□ 1.16
KRT78Q8N1N4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
KRT78Q8N1N4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
KRT78Q8N1N4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
KRT78Q8N1N4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.31■■□□□ 1.16
KRT78Q8N1N4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
KRT78Q8N1N4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.31■■□□□ 1.16
KRT78Q8N1N4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
KRT78Q8N1N4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KRT78Q8N1N4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KRT78Q8N1N4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.31■■□□□ 1.16
KRT78Q8N1N4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KRT78Q8N1N4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KRT78Q8N1N4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
KRT78Q8N1N4 AC093323.1-202ENST00000635031 2045 ntBASIC22.3■■□□□ 1.16
KRT78Q8N1N4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KRT78Q8N1N4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.3■■□□□ 1.16
KRT78Q8N1N4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.3■■□□□ 1.16
KRT78Q8N1N4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
KRT78Q8N1N4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
KRT78Q8N1N4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.3■■□□□ 1.16
KRT78Q8N1N4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KRT78Q8N1N4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KRT78Q8N1N4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
KRT78Q8N1N4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.29■■□□□ 1.16
KRT78Q8N1N4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KRT78Q8N1N4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
KRT78Q8N1N4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KRT78Q8N1N4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.29■■□□□ 1.16
KRT78Q8N1N4 KRT8P33-201ENST00000508125 1423 ntBASIC22.29■■□□□ 1.16
KRT78Q8N1N4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
KRT78Q8N1N4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KRT78Q8N1N4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.29■■□□□ 1.16
KRT78Q8N1N4 AC103834.1-201ENST00000520383 144 ntBASIC22.28■■□□□ 1.16
KRT78Q8N1N4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.28■■□□□ 1.16
KRT78Q8N1N4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KRT78Q8N1N4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KRT78Q8N1N4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KRT78Q8N1N4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.27■■□□□ 1.16
KRT78Q8N1N4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KRT78Q8N1N4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.27■■□□□ 1.16
KRT78Q8N1N4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KRT78Q8N1N4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KRT78Q8N1N4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
KRT78Q8N1N4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms