Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Cchcr1Q8K2I2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
Cchcr1Q8K2I2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Cchcr1Q8K2I2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC24.73■■□□□ 1.55
Cchcr1Q8K2I2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC24.73■■□□□ 1.55
Cchcr1Q8K2I2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Cchcr1Q8K2I2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC24.73■■□□□ 1.55
Cchcr1Q8K2I2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Cchcr1Q8K2I2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cchcr1Q8K2I2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cchcr1Q8K2I2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
Cchcr1Q8K2I2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cchcr1Q8K2I2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Cchcr1Q8K2I2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Cchcr1Q8K2I2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Cchcr1Q8K2I2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Cchcr1Q8K2I2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Cchcr1Q8K2I2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Cchcr1Q8K2I2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Cchcr1Q8K2I2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Cchcr1Q8K2I2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Cchcr1Q8K2I2 Gm11847-201ENSMUST00000125165 1119 ntBASIC24.7■■□□□ 1.54
Cchcr1Q8K2I2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC24.7■■□□□ 1.54
Cchcr1Q8K2I2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC24.7■■□□□ 1.54
Cchcr1Q8K2I2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Cchcr1Q8K2I2 Gm5913-201ENSMUST00000119397 1399 ntBASIC24.69■■□□□ 1.54
Cchcr1Q8K2I2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Cchcr1Q8K2I2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Cchcr1Q8K2I2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Cchcr1Q8K2I2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Cchcr1Q8K2I2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Cchcr1Q8K2I2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC24.68■■□□□ 1.54
Cchcr1Q8K2I2 Gm28536-201ENSMUST00000190971 1317 ntBASIC24.67■■□□□ 1.54
Cchcr1Q8K2I2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cchcr1Q8K2I2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC24.67■■□□□ 1.54
Cchcr1Q8K2I2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Cchcr1Q8K2I2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cchcr1Q8K2I2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Cchcr1Q8K2I2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Cchcr1Q8K2I2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Cchcr1Q8K2I2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cchcr1Q8K2I2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC24.67■■□□□ 1.54
Cchcr1Q8K2I2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cchcr1Q8K2I2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cchcr1Q8K2I2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
Cchcr1Q8K2I2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cchcr1Q8K2I2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Cchcr1Q8K2I2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Cchcr1Q8K2I2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC24.65■■□□□ 1.54
Cchcr1Q8K2I2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Cchcr1Q8K2I2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Cchcr1Q8K2I2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.65■■□□□ 1.54
Cchcr1Q8K2I2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Cchcr1Q8K2I2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC24.64■■□□□ 1.54
Cchcr1Q8K2I2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
Cchcr1Q8K2I2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Cchcr1Q8K2I2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Cchcr1Q8K2I2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Cchcr1Q8K2I2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Cchcr1Q8K2I2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Cchcr1Q8K2I2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
Cchcr1Q8K2I2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Cchcr1Q8K2I2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC24.64■■□□□ 1.53
Cchcr1Q8K2I2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Cchcr1Q8K2I2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Cchcr1Q8K2I2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cchcr1Q8K2I2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cchcr1Q8K2I2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cchcr1Q8K2I2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Cchcr1Q8K2I2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cchcr1Q8K2I2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cchcr1Q8K2I2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cchcr1Q8K2I2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
Cchcr1Q8K2I2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cchcr1Q8K2I2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Cchcr1Q8K2I2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cchcr1Q8K2I2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Cchcr1Q8K2I2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cchcr1Q8K2I2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Cchcr1Q8K2I2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cchcr1Q8K2I2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Cchcr1Q8K2I2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cchcr1Q8K2I2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cchcr1Q8K2I2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Cchcr1Q8K2I2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Cchcr1Q8K2I2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cchcr1Q8K2I2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cchcr1Q8K2I2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
Cchcr1Q8K2I2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cchcr1Q8K2I2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Cchcr1Q8K2I2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cchcr1Q8K2I2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Cchcr1Q8K2I2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Cchcr1Q8K2I2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Cchcr1Q8K2I2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Cchcr1Q8K2I2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC24.6■■□□□ 1.53
Cchcr1Q8K2I2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Cchcr1Q8K2I2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Cchcr1Q8K2I2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
Cchcr1Q8K2I2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 652.4 ms