Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Fam78aQ8C552 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Fam78aQ8C552 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Fam78aQ8C552 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Fam78aQ8C552 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.42■■□□□ 1.18
Fam78aQ8C552 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Fam78aQ8C552 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Fam78aQ8C552 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Fam78aQ8C552 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Fam78aQ8C552 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Fam78aQ8C552 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Fam78aQ8C552 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Fam78aQ8C552 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Fam78aQ8C552 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Fam78aQ8C552 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Fam78aQ8C552 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC22.41■■□□□ 1.18
Fam78aQ8C552 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Fam78aQ8C552 Gm4430-201ENSMUST00000192413 1943 ntBASIC22.4■■□□□ 1.18
Fam78aQ8C552 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Fam78aQ8C552 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Fam78aQ8C552 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Fam78aQ8C552 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.4■■□□□ 1.18
Fam78aQ8C552 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.4■■□□□ 1.18
Fam78aQ8C552 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Fam78aQ8C552 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Fam78aQ8C552 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Fam78aQ8C552 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC22.39■■□□□ 1.17
Fam78aQ8C552 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Fam78aQ8C552 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Fam78aQ8C552 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.38■■□□□ 1.17
Fam78aQ8C552 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC22.38■■□□□ 1.17
Fam78aQ8C552 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Fam78aQ8C552 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Fam78aQ8C552 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Fam78aQ8C552 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Fam78aQ8C552 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Fam78aQ8C552 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC22.37■■□□□ 1.17
Fam78aQ8C552 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Fam78aQ8C552 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Fam78aQ8C552 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Fam78aQ8C552 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Fam78aQ8C552 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Fam78aQ8C552 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Fam78aQ8C552 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Fam78aQ8C552 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Fam78aQ8C552 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC22.35■■□□□ 1.17
Fam78aQ8C552 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Fam78aQ8C552 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Fam78aQ8C552 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Fam78aQ8C552 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
Fam78aQ8C552 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC22.35■■□□□ 1.17
Fam78aQ8C552 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Fam78aQ8C552 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Fam78aQ8C552 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Fam78aQ8C552 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Fam78aQ8C552 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Fam78aQ8C552 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.34■■□□□ 1.17
Fam78aQ8C552 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Fam78aQ8C552 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Fam78aQ8C552 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.34■■□□□ 1.17
Fam78aQ8C552 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Fam78aQ8C552 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Fam78aQ8C552 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Fam78aQ8C552 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Fam78aQ8C552 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Fam78aQ8C552 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Fam78aQ8C552 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC22.33■■□□□ 1.17
Fam78aQ8C552 Krt8-ps-201ENSMUST00000208495 945 ntBASIC22.33■■□□□ 1.17
Fam78aQ8C552 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Fam78aQ8C552 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Fam78aQ8C552 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Fam78aQ8C552 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Fam78aQ8C552 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Fam78aQ8C552 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Fam78aQ8C552 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Fam78aQ8C552 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Fam78aQ8C552 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Fam78aQ8C552 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Fam78aQ8C552 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Fam78aQ8C552 Gm43137-201ENSMUST00000198052 594 ntBASIC22.31■■□□□ 1.16
Fam78aQ8C552 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC22.31■■□□□ 1.16
Fam78aQ8C552 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Fam78aQ8C552 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Fam78aQ8C552 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC22.3■■□□□ 1.16
Fam78aQ8C552 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Fam78aQ8C552 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Fam78aQ8C552 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Fam78aQ8C552 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Fam78aQ8C552 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Fam78aQ8C552 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Fam78aQ8C552 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Fam78aQ8C552 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Fam78aQ8C552 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Fam78aQ8C552 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Fam78aQ8C552 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Fam78aQ8C552 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Fam78aQ8C552 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Fam78aQ8C552 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Fam78aQ8C552 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC22.29■■□□□ 1.16
Fam78aQ8C552 Gm6139-201ENSMUST00000079261 882 ntBASIC22.29■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms