Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Brat1Q8C3R1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Brat1Q8C3R1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Brat1Q8C3R1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
Brat1Q8C3R1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Brat1Q8C3R1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
Brat1Q8C3R1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.09■■□□□ 1.13
Brat1Q8C3R1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.09■■□□□ 1.13
Brat1Q8C3R1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Brat1Q8C3R1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Brat1Q8C3R1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Brat1Q8C3R1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.09■■□□□ 1.13
Brat1Q8C3R1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Brat1Q8C3R1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Brat1Q8C3R1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Brat1Q8C3R1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Brat1Q8C3R1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Brat1Q8C3R1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Brat1Q8C3R1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Brat1Q8C3R1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Brat1Q8C3R1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.08■■□□□ 1.13
Brat1Q8C3R1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Brat1Q8C3R1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Brat1Q8C3R1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Brat1Q8C3R1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Brat1Q8C3R1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Brat1Q8C3R1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Brat1Q8C3R1 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.07■■□□□ 1.12
Brat1Q8C3R1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Brat1Q8C3R1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Brat1Q8C3R1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.07■■□□□ 1.12
Brat1Q8C3R1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Brat1Q8C3R1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Brat1Q8C3R1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Brat1Q8C3R1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.06■■□□□ 1.12
Brat1Q8C3R1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Brat1Q8C3R1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Brat1Q8C3R1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Brat1Q8C3R1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Brat1Q8C3R1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Brat1Q8C3R1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Brat1Q8C3R1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Brat1Q8C3R1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Brat1Q8C3R1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Brat1Q8C3R1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Brat1Q8C3R1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Brat1Q8C3R1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.06■■□□□ 1.12
Brat1Q8C3R1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Brat1Q8C3R1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Brat1Q8C3R1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Brat1Q8C3R1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Brat1Q8C3R1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
Brat1Q8C3R1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Brat1Q8C3R1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.05■■□□□ 1.12
Brat1Q8C3R1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Brat1Q8C3R1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Brat1Q8C3R1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Brat1Q8C3R1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Brat1Q8C3R1 Gm22238-201ENSMUST00000175222 88 ntBASIC22.04■■□□□ 1.12
Brat1Q8C3R1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Brat1Q8C3R1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Brat1Q8C3R1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.04■■□□□ 1.12
Brat1Q8C3R1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Brat1Q8C3R1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.03■■□□□ 1.12
Brat1Q8C3R1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.03■■□□□ 1.12
Brat1Q8C3R1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC22.03■■□□□ 1.12
Brat1Q8C3R1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Brat1Q8C3R1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Brat1Q8C3R1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Brat1Q8C3R1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Brat1Q8C3R1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Brat1Q8C3R1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.01■■□□□ 1.11
Brat1Q8C3R1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.01■■□□□ 1.11
Brat1Q8C3R1 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.01■■□□□ 1.11
Brat1Q8C3R1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Brat1Q8C3R1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Brat1Q8C3R1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC22■■□□□ 1.11
Brat1Q8C3R1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Brat1Q8C3R1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22■■□□□ 1.11
Brat1Q8C3R1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC22■■□□□ 1.11
Brat1Q8C3R1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Brat1Q8C3R1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Brat1Q8C3R1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Brat1Q8C3R1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Brat1Q8C3R1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Brat1Q8C3R1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.99■■□□□ 1.11
Brat1Q8C3R1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.99■■□□□ 1.11
Brat1Q8C3R1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.99■■□□□ 1.11
Brat1Q8C3R1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Brat1Q8C3R1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Brat1Q8C3R1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Brat1Q8C3R1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Brat1Q8C3R1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Brat1Q8C3R1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Brat1Q8C3R1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Brat1Q8C3R1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Brat1Q8C3R1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.97■■□□□ 1.11
Brat1Q8C3R1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Brat1Q8C3R1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Brat1Q8C3R1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms