Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Scfd1Q8BRF7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Scfd1Q8BRF7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC24.12■■□□□ 1.45
Scfd1Q8BRF7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Scfd1Q8BRF7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Scfd1Q8BRF7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Scfd1Q8BRF7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC24.12■■□□□ 1.45
Scfd1Q8BRF7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Scfd1Q8BRF7 Gm4430-201ENSMUST00000192413 1943 ntBASIC24.11■■□□□ 1.45
Scfd1Q8BRF7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC24.11■■□□□ 1.45
Scfd1Q8BRF7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Scfd1Q8BRF7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Scfd1Q8BRF7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Scfd1Q8BRF7 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Scfd1Q8BRF7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Scfd1Q8BRF7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Scfd1Q8BRF7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Scfd1Q8BRF7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Scfd1Q8BRF7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Scfd1Q8BRF7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC24.1■■□□□ 1.45
Scfd1Q8BRF7 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Scfd1Q8BRF7 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Scfd1Q8BRF7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Scfd1Q8BRF7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC24.09■■□□□ 1.45
Scfd1Q8BRF7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Scfd1Q8BRF7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Scfd1Q8BRF7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Scfd1Q8BRF7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Scfd1Q8BRF7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC24.08■■□□□ 1.45
Scfd1Q8BRF7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Scfd1Q8BRF7 Appbp2os-202ENSMUST00000206972 447 ntBASIC24.08■■□□□ 1.45
Scfd1Q8BRF7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC24.08■■□□□ 1.45
Scfd1Q8BRF7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Scfd1Q8BRF7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Scfd1Q8BRF7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Scfd1Q8BRF7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Scfd1Q8BRF7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Scfd1Q8BRF7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Scfd1Q8BRF7 Gm12821-201ENSMUST00000120022 600 ntBASIC24.07■■□□□ 1.44
Scfd1Q8BRF7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Scfd1Q8BRF7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
Scfd1Q8BRF7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Scfd1Q8BRF7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Scfd1Q8BRF7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Scfd1Q8BRF7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC24.06■■□□□ 1.44
Scfd1Q8BRF7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Scfd1Q8BRF7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Scfd1Q8BRF7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Scfd1Q8BRF7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Scfd1Q8BRF7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Scfd1Q8BRF7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Scfd1Q8BRF7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Scfd1Q8BRF7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Scfd1Q8BRF7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
Scfd1Q8BRF7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC24.04■■□□□ 1.44
Scfd1Q8BRF7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Scfd1Q8BRF7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Scfd1Q8BRF7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Scfd1Q8BRF7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Scfd1Q8BRF7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC24.03■■□□□ 1.44
Scfd1Q8BRF7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Scfd1Q8BRF7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Scfd1Q8BRF7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC24.03■■□□□ 1.44
Scfd1Q8BRF7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Scfd1Q8BRF7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Scfd1Q8BRF7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Scfd1Q8BRF7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Scfd1Q8BRF7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Scfd1Q8BRF7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC24.02■■□□□ 1.44
Scfd1Q8BRF7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC24.02■■□□□ 1.44
Scfd1Q8BRF7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Scfd1Q8BRF7 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Scfd1Q8BRF7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Scfd1Q8BRF7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.43
Scfd1Q8BRF7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Scfd1Q8BRF7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Scfd1Q8BRF7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Scfd1Q8BRF7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Scfd1Q8BRF7 Gm27454-201ENSMUST00000185090 204 ntBASIC24.01■■□□□ 1.43
Scfd1Q8BRF7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Scfd1Q8BRF7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC24■■□□□ 1.43
Scfd1Q8BRF7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC24■■□□□ 1.43
Scfd1Q8BRF7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC24■■□□□ 1.43
Scfd1Q8BRF7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Scfd1Q8BRF7 Gm42418-201ENSMUST00000182010 1831 ntBASIC24■■□□□ 1.43
Scfd1Q8BRF7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Scfd1Q8BRF7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Scfd1Q8BRF7 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Scfd1Q8BRF7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Scfd1Q8BRF7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.99■■□□□ 1.43
Scfd1Q8BRF7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Scfd1Q8BRF7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Scfd1Q8BRF7 Gm7143-201ENSMUST00000222811 859 ntBASIC23.99■■□□□ 1.43
Scfd1Q8BRF7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Scfd1Q8BRF7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Scfd1Q8BRF7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Scfd1Q8BRF7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Scfd1Q8BRF7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC23.99■■□□□ 1.43
Scfd1Q8BRF7 Gm9207-201ENSMUST00000198773 1115 ntBASIC23.98■■□□□ 1.43
Scfd1Q8BRF7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms