Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp8Q80U87 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Usp8Q80U87 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp8Q80U87 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp8Q80U87 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp8Q80U87 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.83■□□□□ 0.92
Usp8Q80U87 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp8Q80U87 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp8Q80U87 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.82■□□□□ 0.92
Usp8Q80U87 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Usp8Q80U87 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.82■□□□□ 0.92
Usp8Q80U87 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.82■□□□□ 0.92
Usp8Q80U87 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp8Q80U87 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Usp8Q80U87 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Usp8Q80U87 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp8Q80U87 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp8Q80U87 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Usp8Q80U87 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp8Q80U87 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp8Q80U87 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.81■□□□□ 0.92
Usp8Q80U87 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp8Q80U87 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp8Q80U87 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp8Q80U87 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp8Q80U87 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Usp8Q80U87 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp8Q80U87 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
Usp8Q80U87 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp8Q80U87 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.8■□□□□ 0.92
Usp8Q80U87 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp8Q80U87 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.8■□□□□ 0.92
Usp8Q80U87 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp8Q80U87 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp8Q80U87 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp8Q80U87 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Usp8Q80U87 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp8Q80U87 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp8Q80U87 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Usp8Q80U87 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.79■□□□□ 0.92
Usp8Q80U87 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.79■□□□□ 0.92
Usp8Q80U87 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp8Q80U87 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.79■□□□□ 0.92
Usp8Q80U87 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp8Q80U87 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp8Q80U87 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp8Q80U87 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.78■□□□□ 0.92
Usp8Q80U87 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp8Q80U87 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp8Q80U87 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp8Q80U87 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp8Q80U87 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp8Q80U87 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Usp8Q80U87 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp8Q80U87 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp8Q80U87 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp8Q80U87 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Usp8Q80U87 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp8Q80U87 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Usp8Q80U87 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp8Q80U87 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.77■□□□□ 0.92
Usp8Q80U87 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp8Q80U87 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Usp8Q80U87 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp8Q80U87 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp8Q80U87 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp8Q80U87 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.77■□□□□ 0.91
Usp8Q80U87 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp8Q80U87 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp8Q80U87 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Usp8Q80U87 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp8Q80U87 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp8Q80U87 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp8Q80U87 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp8Q80U87 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp8Q80U87 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp8Q80U87 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp8Q80U87 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp8Q80U87 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp8Q80U87 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Usp8Q80U87 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp8Q80U87 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp8Q80U87 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp8Q80U87 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp8Q80U87 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp8Q80U87 Iqck-206ENSMUST00000208658 2891 ntBASIC20.74■□□□□ 0.91
Usp8Q80U87 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.74■□□□□ 0.91
Usp8Q80U87 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp8Q80U87 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp8Q80U87 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Usp8Q80U87 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp8Q80U87 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp8Q80U87 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp8Q80U87 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Usp8Q80U87 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp8Q80U87 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Usp8Q80U87 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp8Q80U87 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp8Q80U87 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp8Q80U87 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms