Protein–RNA interactions for Protein: Q6ZWS4

Cnih3, Protein cornichon homolog 3, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih3Q6ZWS4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cnih3Q6ZWS4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cnih3Q6ZWS4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cnih3Q6ZWS4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cnih3Q6ZWS4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cnih3Q6ZWS4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cnih3Q6ZWS4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnih3Q6ZWS4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.21■□□□□ 0.67
Cnih3Q6ZWS4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnih3Q6ZWS4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cnih3Q6ZWS4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnih3Q6ZWS4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnih3Q6ZWS4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.21■□□□□ 0.67
Cnih3Q6ZWS4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.21■□□□□ 0.67
Cnih3Q6ZWS4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnih3Q6ZWS4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnih3Q6ZWS4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cnih3Q6ZWS4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.21■□□□□ 0.67
Cnih3Q6ZWS4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cnih3Q6ZWS4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cnih3Q6ZWS4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cnih3Q6ZWS4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.2■□□□□ 0.66
Cnih3Q6ZWS4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cnih3Q6ZWS4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cnih3Q6ZWS4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.19■□□□□ 0.66
Cnih3Q6ZWS4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cnih3Q6ZWS4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cnih3Q6ZWS4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cnih3Q6ZWS4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cnih3Q6ZWS4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnih3Q6ZWS4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnih3Q6ZWS4 Gm8503-201ENSMUST00000118131 455 ntBASIC19.18■□□□□ 0.66
Cnih3Q6ZWS4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnih3Q6ZWS4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnih3Q6ZWS4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cnih3Q6ZWS4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cnih3Q6ZWS4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnih3Q6ZWS4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnih3Q6ZWS4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cnih3Q6ZWS4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnih3Q6ZWS4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cnih3Q6ZWS4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cnih3Q6ZWS4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cnih3Q6ZWS4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cnih3Q6ZWS4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cnih3Q6ZWS4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.17■□□□□ 0.66
Cnih3Q6ZWS4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnih3Q6ZWS4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnih3Q6ZWS4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.16■□□□□ 0.66
Cnih3Q6ZWS4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cnih3Q6ZWS4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnih3Q6ZWS4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnih3Q6ZWS4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cnih3Q6ZWS4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnih3Q6ZWS4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cnih3Q6ZWS4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnih3Q6ZWS4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.16■□□□□ 0.66
Cnih3Q6ZWS4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnih3Q6ZWS4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cnih3Q6ZWS4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnih3Q6ZWS4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Cnih3Q6ZWS4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnih3Q6ZWS4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.16■□□□□ 0.66
Cnih3Q6ZWS4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cnih3Q6ZWS4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.15■□□□□ 0.66
Cnih3Q6ZWS4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cnih3Q6ZWS4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cnih3Q6ZWS4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cnih3Q6ZWS4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cnih3Q6ZWS4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cnih3Q6ZWS4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cnih3Q6ZWS4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cnih3Q6ZWS4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cnih3Q6ZWS4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cnih3Q6ZWS4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cnih3Q6ZWS4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cnih3Q6ZWS4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cnih3Q6ZWS4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cnih3Q6ZWS4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
Cnih3Q6ZWS4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cnih3Q6ZWS4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cnih3Q6ZWS4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cnih3Q6ZWS4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cnih3Q6ZWS4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cnih3Q6ZWS4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cnih3Q6ZWS4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cnih3Q6ZWS4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cnih3Q6ZWS4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cnih3Q6ZWS4 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.13■□□□□ 0.65
Cnih3Q6ZWS4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cnih3Q6ZWS4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cnih3Q6ZWS4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cnih3Q6ZWS4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cnih3Q6ZWS4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cnih3Q6ZWS4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cnih3Q6ZWS4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cnih3Q6ZWS4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cnih3Q6ZWS4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cnih3Q6ZWS4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.12■□□□□ 0.65
Cnih3Q6ZWS4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 192.9 ms