Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Scn10aQ6QIY3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
Scn10aQ6QIY3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Scn10aQ6QIY3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Scn10aQ6QIY3 Gm26571-201ENSMUST00000181399 666 ntBASIC24.41■■□□□ 1.5
Scn10aQ6QIY3 Gm8493-201ENSMUST00000196881 489 ntBASIC24.41■■□□□ 1.5
Scn10aQ6QIY3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Scn10aQ6QIY3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC24.41■■□□□ 1.5
Scn10aQ6QIY3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Scn10aQ6QIY3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Scn10aQ6QIY3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Scn10aQ6QIY3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Scn10aQ6QIY3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Scn10aQ6QIY3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Scn10aQ6QIY3 Gm5874-201ENSMUST00000096101 508 ntBASIC24.39■■□□□ 1.49
Scn10aQ6QIY3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC24.38■■□□□ 1.49
Scn10aQ6QIY3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC24.38■■□□□ 1.49
Scn10aQ6QIY3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Scn10aQ6QIY3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC24.38■■□□□ 1.49
Scn10aQ6QIY3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC24.38■■□□□ 1.49
Scn10aQ6QIY3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Scn10aQ6QIY3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Scn10aQ6QIY3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Scn10aQ6QIY3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
Scn10aQ6QIY3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Scn10aQ6QIY3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Scn10aQ6QIY3 Gm5576-201ENSMUST00000075809 1236 ntBASIC24.36■■□□□ 1.49
Scn10aQ6QIY3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Scn10aQ6QIY3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC24.36■■□□□ 1.49
Scn10aQ6QIY3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Scn10aQ6QIY3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC24.36■■□□□ 1.49
Scn10aQ6QIY3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC24.36■■□□□ 1.49
Scn10aQ6QIY3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Scn10aQ6QIY3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Scn10aQ6QIY3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Scn10aQ6QIY3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
Scn10aQ6QIY3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Scn10aQ6QIY3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Scn10aQ6QIY3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC24.34■■□□□ 1.49
Scn10aQ6QIY3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Scn10aQ6QIY3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Scn10aQ6QIY3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC24.34■■□□□ 1.49
Scn10aQ6QIY3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
Scn10aQ6QIY3 Gm43759-201ENSMUST00000196925 1261 ntBASIC24.34■■□□□ 1.49
Scn10aQ6QIY3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Scn10aQ6QIY3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Scn10aQ6QIY3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC24.34■■□□□ 1.49
Scn10aQ6QIY3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Scn10aQ6QIY3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Scn10aQ6QIY3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Scn10aQ6QIY3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Scn10aQ6QIY3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC24.33■■□□□ 1.49
Scn10aQ6QIY3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Scn10aQ6QIY3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
Scn10aQ6QIY3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC24.33■■□□□ 1.48
Scn10aQ6QIY3 Gm7143-201ENSMUST00000222811 859 ntBASIC24.33■■□□□ 1.48
Scn10aQ6QIY3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Scn10aQ6QIY3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Scn10aQ6QIY3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Scn10aQ6QIY3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Scn10aQ6QIY3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC24.32■■□□□ 1.48
Scn10aQ6QIY3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC24.32■■□□□ 1.48
Scn10aQ6QIY3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Scn10aQ6QIY3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Scn10aQ6QIY3 Gm4430-201ENSMUST00000192413 1943 ntBASIC24.32■■□□□ 1.48
Scn10aQ6QIY3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Scn10aQ6QIY3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC24.31■■□□□ 1.48
Scn10aQ6QIY3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Scn10aQ6QIY3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Scn10aQ6QIY3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Scn10aQ6QIY3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Scn10aQ6QIY3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC24.31■■□□□ 1.48
Scn10aQ6QIY3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Scn10aQ6QIY3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Scn10aQ6QIY3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC24.3■■□□□ 1.48
Scn10aQ6QIY3 Gm10849-201ENSMUST00000100397 618 ntBASIC24.3■■□□□ 1.48
Scn10aQ6QIY3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC24.3■■□□□ 1.48
Scn10aQ6QIY3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Scn10aQ6QIY3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Scn10aQ6QIY3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Scn10aQ6QIY3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Scn10aQ6QIY3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Scn10aQ6QIY3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Scn10aQ6QIY3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Scn10aQ6QIY3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Scn10aQ6QIY3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Scn10aQ6QIY3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Scn10aQ6QIY3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Scn10aQ6QIY3 Spcs1-204ENSMUST00000226782 949 ntBASIC24.28■■□□□ 1.48
Scn10aQ6QIY3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Scn10aQ6QIY3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC24.27■■□□□ 1.48
Scn10aQ6QIY3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Scn10aQ6QIY3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Scn10aQ6QIY3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Scn10aQ6QIY3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Scn10aQ6QIY3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Scn10aQ6QIY3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Scn10aQ6QIY3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Scn10aQ6QIY3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Scn10aQ6QIY3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms