Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Shroom1Q5SX79 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Shroom1Q5SX79 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Shroom1Q5SX79 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Shroom1Q5SX79 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC22.27■■□□□ 1.16
Shroom1Q5SX79 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Shroom1Q5SX79 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Shroom1Q5SX79 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
Shroom1Q5SX79 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC22.26■■□□□ 1.15
Shroom1Q5SX79 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Shroom1Q5SX79 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Shroom1Q5SX79 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Shroom1Q5SX79 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC22.25■■□□□ 1.15
Shroom1Q5SX79 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Shroom1Q5SX79 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Shroom1Q5SX79 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Shroom1Q5SX79 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Shroom1Q5SX79 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Shroom1Q5SX79 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.24■■□□□ 1.15
Shroom1Q5SX79 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shroom1Q5SX79 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
Shroom1Q5SX79 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shroom1Q5SX79 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Shroom1Q5SX79 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.24■■□□□ 1.15
Shroom1Q5SX79 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shroom1Q5SX79 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.24■■□□□ 1.15
Shroom1Q5SX79 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shroom1Q5SX79 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shroom1Q5SX79 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Shroom1Q5SX79 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shroom1Q5SX79 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shroom1Q5SX79 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shroom1Q5SX79 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.23■■□□□ 1.15
Shroom1Q5SX79 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.23■■□□□ 1.15
Shroom1Q5SX79 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.23■■□□□ 1.15
Shroom1Q5SX79 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shroom1Q5SX79 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shroom1Q5SX79 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shroom1Q5SX79 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shroom1Q5SX79 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.23■■□□□ 1.15
Shroom1Q5SX79 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shroom1Q5SX79 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Shroom1Q5SX79 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Shroom1Q5SX79 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Shroom1Q5SX79 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Shroom1Q5SX79 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.22■■□□□ 1.15
Shroom1Q5SX79 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Shroom1Q5SX79 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Shroom1Q5SX79 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
Shroom1Q5SX79 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Shroom1Q5SX79 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Shroom1Q5SX79 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.22■■□□□ 1.15
Shroom1Q5SX79 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Shroom1Q5SX79 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shroom1Q5SX79 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Shroom1Q5SX79 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shroom1Q5SX79 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.21■■□□□ 1.15
Shroom1Q5SX79 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Shroom1Q5SX79 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.21■■□□□ 1.15
Shroom1Q5SX79 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC22.21■■□□□ 1.15
Shroom1Q5SX79 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.21■■□□□ 1.15
Shroom1Q5SX79 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shroom1Q5SX79 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Shroom1Q5SX79 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.2■■□□□ 1.14
Shroom1Q5SX79 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Shroom1Q5SX79 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Shroom1Q5SX79 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
Shroom1Q5SX79 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.2■■□□□ 1.14
Shroom1Q5SX79 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.2■■□□□ 1.14
Shroom1Q5SX79 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Shroom1Q5SX79 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.2■■□□□ 1.14
Shroom1Q5SX79 Golgb1-201ENSMUST00000023534 498 ntBASIC22.2■■□□□ 1.14
Shroom1Q5SX79 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Shroom1Q5SX79 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.2■■□□□ 1.14
Shroom1Q5SX79 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Shroom1Q5SX79 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Shroom1Q5SX79 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Shroom1Q5SX79 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Shroom1Q5SX79 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.19■■□□□ 1.14
Shroom1Q5SX79 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Shroom1Q5SX79 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
Shroom1Q5SX79 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Shroom1Q5SX79 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Shroom1Q5SX79 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Shroom1Q5SX79 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Shroom1Q5SX79 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.18■■□□□ 1.14
Shroom1Q5SX79 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Shroom1Q5SX79 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.18■■□□□ 1.14
Shroom1Q5SX79 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Shroom1Q5SX79 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Shroom1Q5SX79 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.17■■□□□ 1.14
Shroom1Q5SX79 Gm12821-201ENSMUST00000120022 600 ntBASIC22.17■■□□□ 1.14
Shroom1Q5SX79 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.17■■□□□ 1.14
Shroom1Q5SX79 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Shroom1Q5SX79 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Shroom1Q5SX79 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Shroom1Q5SX79 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Shroom1Q5SX79 Appbp2os-202ENSMUST00000206972 447 ntBASIC22.16■■□□□ 1.14
Shroom1Q5SX79 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.16■■□□□ 1.14
Shroom1Q5SX79 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms