Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trav6-3Q5R1E6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trav6-3Q5R1E6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-3Q5R1E6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-3Q5R1E6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-3Q5R1E6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-3Q5R1E6 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.79■□□□□ 0.28
Trav6-3Q5R1E6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Trav6-3Q5R1E6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-3Q5R1E6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-3Q5R1E6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-3Q5R1E6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-3Q5R1E6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-3Q5R1E6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.78■□□□□ 0.28
Trav6-3Q5R1E6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.78■□□□□ 0.28
Trav6-3Q5R1E6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.78■□□□□ 0.28
Trav6-3Q5R1E6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-3Q5R1E6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav6-3Q5R1E6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav6-3Q5R1E6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-3Q5R1E6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6-3Q5R1E6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.77■□□□□ 0.28
Trav6-3Q5R1E6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6-3Q5R1E6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6-3Q5R1E6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6-3Q5R1E6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6-3Q5R1E6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6-3Q5R1E6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6-3Q5R1E6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Trav6-3Q5R1E6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6-3Q5R1E6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-3Q5R1E6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-3Q5R1E6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-3Q5R1E6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-3Q5R1E6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-3Q5R1E6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-3Q5R1E6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trav6-3Q5R1E6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-3Q5R1E6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-3Q5R1E6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-3Q5R1E6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Trav6-3Q5R1E6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-3Q5R1E6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-3Q5R1E6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-3Q5R1E6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-3Q5R1E6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-3Q5R1E6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-3Q5R1E6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-3Q5R1E6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-3Q5R1E6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-3Q5R1E6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Trav6-3Q5R1E6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-3Q5R1E6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-3Q5R1E6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-3Q5R1E6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-3Q5R1E6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-3Q5R1E6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-3Q5R1E6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.74■□□□□ 0.27
Trav6-3Q5R1E6 Gm10420-201ENSMUST00000121713 882 ntBASIC16.74■□□□□ 0.27
Trav6-3Q5R1E6 Gm12366-201ENSMUST00000121722 873 ntBASIC16.74■□□□□ 0.27
Trav6-3Q5R1E6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav6-3Q5R1E6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.74■□□□□ 0.27
Trav6-3Q5R1E6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav6-3Q5R1E6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
Trav6-3Q5R1E6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-3Q5R1E6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.74■□□□□ 0.27
Trav6-3Q5R1E6 Gm5786-201ENSMUST00000085368 882 ntBASIC16.74■□□□□ 0.27
Trav6-3Q5R1E6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-3Q5R1E6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-3Q5R1E6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav6-3Q5R1E6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-3Q5R1E6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-3Q5R1E6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-3Q5R1E6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-3Q5R1E6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-3Q5R1E6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-3Q5R1E6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trav6-3Q5R1E6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
Trav6-3Q5R1E6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-3Q5R1E6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-3Q5R1E6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav6-3Q5R1E6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-3Q5R1E6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-3Q5R1E6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.72■□□□□ 0.27
Trav6-3Q5R1E6 Mir6538-201ENSMUST00000183713 110 ntBASIC16.72■□□□□ 0.27
Trav6-3Q5R1E6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-3Q5R1E6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-3Q5R1E6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav6-3Q5R1E6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-3Q5R1E6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-3Q5R1E6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-3Q5R1E6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-3Q5R1E6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-3Q5R1E6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.71■□□□□ 0.27
Trav6-3Q5R1E6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-3Q5R1E6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-3Q5R1E6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-3Q5R1E6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trav6-3Q5R1E6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-3Q5R1E6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 113.5 ms