Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Brf2Q3UAW9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Brf2Q3UAW9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Brf2Q3UAW9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.7■□□□□ 0.74
Brf2Q3UAW9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Brf2Q3UAW9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Brf2Q3UAW9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Brf2Q3UAW9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Brf2Q3UAW9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Brf2Q3UAW9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Brf2Q3UAW9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Brf2Q3UAW9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Brf2Q3UAW9 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.69■□□□□ 0.74
Brf2Q3UAW9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.69■□□□□ 0.74
Brf2Q3UAW9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brf2Q3UAW9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brf2Q3UAW9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brf2Q3UAW9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Brf2Q3UAW9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brf2Q3UAW9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.68■□□□□ 0.74
Brf2Q3UAW9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.68■□□□□ 0.74
Brf2Q3UAW9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Brf2Q3UAW9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.68■□□□□ 0.74
Brf2Q3UAW9 Gm45444-201ENSMUST00000211394 898 ntBASIC19.68■□□□□ 0.74
Brf2Q3UAW9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brf2Q3UAW9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brf2Q3UAW9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brf2Q3UAW9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brf2Q3UAW9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Brf2Q3UAW9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brf2Q3UAW9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brf2Q3UAW9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Brf2Q3UAW9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brf2Q3UAW9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brf2Q3UAW9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Brf2Q3UAW9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brf2Q3UAW9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brf2Q3UAW9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brf2Q3UAW9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Brf2Q3UAW9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brf2Q3UAW9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brf2Q3UAW9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.66■□□□□ 0.74
Brf2Q3UAW9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brf2Q3UAW9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Brf2Q3UAW9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brf2Q3UAW9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Brf2Q3UAW9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Brf2Q3UAW9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brf2Q3UAW9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brf2Q3UAW9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brf2Q3UAW9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Brf2Q3UAW9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Brf2Q3UAW9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Brf2Q3UAW9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Brf2Q3UAW9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Brf2Q3UAW9 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.64■□□□□ 0.73
Brf2Q3UAW9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Brf2Q3UAW9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brf2Q3UAW9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brf2Q3UAW9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Brf2Q3UAW9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Brf2Q3UAW9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Brf2Q3UAW9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.63■□□□□ 0.73
Brf2Q3UAW9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brf2Q3UAW9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brf2Q3UAW9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Brf2Q3UAW9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Brf2Q3UAW9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.62■□□□□ 0.73
Brf2Q3UAW9 Gm5921-201ENSMUST00000075898 882 ntBASIC19.62■□□□□ 0.73
Brf2Q3UAW9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
Brf2Q3UAW9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brf2Q3UAW9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brf2Q3UAW9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brf2Q3UAW9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Brf2Q3UAW9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Brf2Q3UAW9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brf2Q3UAW9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brf2Q3UAW9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brf2Q3UAW9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brf2Q3UAW9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brf2Q3UAW9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brf2Q3UAW9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.6■□□□□ 0.73
Brf2Q3UAW9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brf2Q3UAW9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brf2Q3UAW9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brf2Q3UAW9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.6■□□□□ 0.73
Brf2Q3UAW9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.6■□□□□ 0.73
Brf2Q3UAW9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brf2Q3UAW9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Brf2Q3UAW9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Brf2Q3UAW9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Brf2Q3UAW9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brf2Q3UAW9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Brf2Q3UAW9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brf2Q3UAW9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brf2Q3UAW9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brf2Q3UAW9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brf2Q3UAW9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Brf2Q3UAW9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brf2Q3UAW9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms