Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sec61a1P61620 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sec61a1P61620 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sec61a1P61620 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sec61a1P61620 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sec61a1P61620 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sec61a1P61620 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sec61a1P61620 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sec61a1P61620 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sec61a1P61620 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sec61a1P61620 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sec61a1P61620 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Sec61a1P61620 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sec61a1P61620 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Sec61a1P61620 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sec61a1P61620 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.23■□□□□ 0.51
Sec61a1P61620 Gm5921-201ENSMUST00000075898 882 ntBASIC18.23■□□□□ 0.51
Sec61a1P61620 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sec61a1P61620 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sec61a1P61620 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sec61a1P61620 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sec61a1P61620 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sec61a1P61620 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.22■□□□□ 0.51
Sec61a1P61620 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sec61a1P61620 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sec61a1P61620 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sec61a1P61620 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.22■□□□□ 0.51
Sec61a1P61620 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.22■□□□□ 0.51
Sec61a1P61620 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sec61a1P61620 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sec61a1P61620 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.21■□□□□ 0.51
Sec61a1P61620 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sec61a1P61620 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sec61a1P61620 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sec61a1P61620 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sec61a1P61620 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sec61a1P61620 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sec61a1P61620 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Sec61a1P61620 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sec61a1P61620 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sec61a1P61620 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.2■□□□□ 0.5
Sec61a1P61620 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sec61a1P61620 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sec61a1P61620 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sec61a1P61620 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Sec61a1P61620 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Sec61a1P61620 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Sec61a1P61620 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.19■□□□□ 0.5
Sec61a1P61620 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sec61a1P61620 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Sec61a1P61620 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sec61a1P61620 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Sec61a1P61620 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
Sec61a1P61620 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sec61a1P61620 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Sec61a1P61620 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sec61a1P61620 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Sec61a1P61620 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sec61a1P61620 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sec61a1P61620 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sec61a1P61620 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sec61a1P61620 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sec61a1P61620 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Sec61a1P61620 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sec61a1P61620 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.17■□□□□ 0.5
Sec61a1P61620 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.17■□□□□ 0.5
Sec61a1P61620 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Sec61a1P61620 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sec61a1P61620 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Sec61a1P61620 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sec61a1P61620 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sec61a1P61620 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Sec61a1P61620 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Sec61a1P61620 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sec61a1P61620 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.17■□□□□ 0.5
Sec61a1P61620 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sec61a1P61620 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sec61a1P61620 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sec61a1P61620 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.16■□□□□ 0.5
Sec61a1P61620 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Sec61a1P61620 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sec61a1P61620 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sec61a1P61620 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sec61a1P61620 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sec61a1P61620 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sec61a1P61620 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sec61a1P61620 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sec61a1P61620 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.15■□□□□ 0.5
Sec61a1P61620 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Sec61a1P61620 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sec61a1P61620 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.15■□□□□ 0.5
Sec61a1P61620 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Sec61a1P61620 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sec61a1P61620 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sec61a1P61620 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sec61a1P61620 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sec61a1P61620 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.14■□□□□ 0.49
Sec61a1P61620 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sec61a1P61620 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sec61a1P61620 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms