Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd27P41272 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd27P41272 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd27P41272 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd27P41272 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.84■□□□□ 0.29
Cd27P41272 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd27P41272 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
Cd27P41272 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd27P41272 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cd27P41272 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd27P41272 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.83■□□□□ 0.28
Cd27P41272 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd27P41272 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd27P41272 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd27P41272 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd27P41272 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd27P41272 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd27P41272 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd27P41272 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cd27P41272 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd27P41272 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd27P41272 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd27P41272 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cd27P41272 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.82■□□□□ 0.28
Cd27P41272 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd27P41272 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cd27P41272 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.81■□□□□ 0.28
Cd27P41272 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.81■□□□□ 0.28
Cd27P41272 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd27P41272 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd27P41272 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Cd27P41272 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd27P41272 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.8■□□□□ 0.28
Cd27P41272 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.8■□□□□ 0.28
Cd27P41272 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd27P41272 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cd27P41272 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd27P41272 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd27P41272 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd27P41272 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.8■□□□□ 0.28
Cd27P41272 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd27P41272 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cd27P41272 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd27P41272 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd27P41272 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd27P41272 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cd27P41272 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.79■□□□□ 0.28
Cd27P41272 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd27P41272 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd27P41272 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Cd27P41272 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd27P41272 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd27P41272 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd27P41272 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd27P41272 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd27P41272 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cd27P41272 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.78■□□□□ 0.28
Cd27P41272 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.78■□□□□ 0.28
Cd27P41272 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.78■□□□□ 0.28
Cd27P41272 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.78■□□□□ 0.28
Cd27P41272 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.78■□□□□ 0.28
Cd27P41272 Gm10399-202ENSMUST00000202768 748 ntBASIC16.78■□□□□ 0.28
Cd27P41272 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.78■□□□□ 0.28
Cd27P41272 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd27P41272 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Cd27P41272 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd27P41272 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd27P41272 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd27P41272 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd27P41272 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cd27P41272 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.77■□□□□ 0.28
Cd27P41272 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd27P41272 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd27P41272 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd27P41272 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Cd27P41272 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd27P41272 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd27P41272 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd27P41272 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd27P41272 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd27P41272 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd27P41272 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd27P41272 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd27P41272 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cd27P41272 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd27P41272 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cd27P41272 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd27P41272 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd27P41272 Gm9959-201ENSMUST00000068277 390 ntBASIC16.76■□□□□ 0.27
Cd27P41272 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd27P41272 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd27P41272 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd27P41272 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd27P41272 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.75■□□□□ 0.27
Cd27P41272 Gm40881-201ENSMUST00000223397 166 ntBASIC16.75■□□□□ 0.27
Cd27P41272 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cd27P41272 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd27P41272 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cd27P41272 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.74■□□□□ 0.27
Cd27P41272 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms