Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp9P41245 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp9P41245 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp9P41245 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp9P41245 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.39■□□□□ 0.37
Mmp9P41245 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Mmp9P41245 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.39■□□□□ 0.37
Mmp9P41245 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp9P41245 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp9P41245 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.38■□□□□ 0.37
Mmp9P41245 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp9P41245 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Mmp9P41245 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.38■□□□□ 0.37
Mmp9P41245 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.38■□□□□ 0.37
Mmp9P41245 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp9P41245 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.38■□□□□ 0.37
Mmp9P41245 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp9P41245 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp9P41245 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp9P41245 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Mmp9P41245 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp9P41245 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp9P41245 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Mmp9P41245 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp9P41245 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp9P41245 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp9P41245 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp9P41245 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp9P41245 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp9P41245 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Mmp9P41245 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp9P41245 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.36■□□□□ 0.37
Mmp9P41245 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp9P41245 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp9P41245 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.36■□□□□ 0.37
Mmp9P41245 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp9P41245 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp9P41245 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Mmp9P41245 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp9P41245 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp9P41245 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Mmp9P41245 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp9P41245 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Mmp9P41245 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.35■□□□□ 0.37
Mmp9P41245 Terc-201ENSMUST00000082862 423 ntBASIC17.35■□□□□ 0.37
Mmp9P41245 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp9P41245 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp9P41245 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Mmp9P41245 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp9P41245 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Mmp9P41245 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Mmp9P41245 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp9P41245 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp9P41245 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.34■□□□□ 0.37
Mmp9P41245 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.34■□□□□ 0.37
Mmp9P41245 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Mmp9P41245 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp9P41245 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp9P41245 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp9P41245 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.34■□□□□ 0.37
Mmp9P41245 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp9P41245 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp9P41245 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp9P41245 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp9P41245 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Mmp9P41245 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Mmp9P41245 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp9P41245 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp9P41245 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp9P41245 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp9P41245 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp9P41245 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp9P41245 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp9P41245 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp9P41245 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Mmp9P41245 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.32■□□□□ 0.36
Mmp9P41245 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Mmp9P41245 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp9P41245 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.31■□□□□ 0.36
Mmp9P41245 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.31■□□□□ 0.36
Mmp9P41245 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp9P41245 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp9P41245 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp9P41245 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp9P41245 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Mmp9P41245 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.3■□□□□ 0.36
Mmp9P41245 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp9P41245 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Mmp9P41245 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.3■□□□□ 0.36
Mmp9P41245 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp9P41245 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp9P41245 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp9P41245 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp9P41245 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp9P41245 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Mmp9P41245 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Mmp9P41245 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp9P41245 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp9P41245 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp9P41245 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms