Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Fen1P39749 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Fen1P39749 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Fen1P39749 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Fen1P39749 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Fen1P39749 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Fen1P39749 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Fen1P39749 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Fen1P39749 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Fen1P39749 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Fen1P39749 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Fen1P39749 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Fen1P39749 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Fen1P39749 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.85■□□□□ 0.93
Fen1P39749 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Fen1P39749 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Fen1P39749 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Fen1P39749 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Fen1P39749 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Fen1P39749 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Fen1P39749 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fen1P39749 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.84■□□□□ 0.93
Fen1P39749 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fen1P39749 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fen1P39749 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Fen1P39749 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fen1P39749 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.83■□□□□ 0.93
Fen1P39749 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Fen1P39749 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
Fen1P39749 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.83■□□□□ 0.92
Fen1P39749 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Fen1P39749 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Fen1P39749 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Fen1P39749 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Fen1P39749 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.82■□□□□ 0.92
Fen1P39749 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Fen1P39749 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Fen1P39749 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Fen1P39749 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Fen1P39749 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.81■□□□□ 0.92
Fen1P39749 Scarna2-201ENSMUST00000157560 414 ntBASIC20.81■□□□□ 0.92
Fen1P39749 Gm16437-201ENSMUST00000025669 507 ntBASIC20.81■□□□□ 0.92
Fen1P39749 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Fen1P39749 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Fen1P39749 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Fen1P39749 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Fen1P39749 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Fen1P39749 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Fen1P39749 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Fen1P39749 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Fen1P39749 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Fen1P39749 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Fen1P39749 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fen1P39749 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fen1P39749 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fen1P39749 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fen1P39749 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fen1P39749 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.79■□□□□ 0.92
Fen1P39749 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fen1P39749 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.79■□□□□ 0.92
Fen1P39749 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fen1P39749 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Fen1P39749 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Fen1P39749 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Fen1P39749 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Fen1P39749 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.78■□□□□ 0.92
Fen1P39749 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Fen1P39749 Cap2-205ENSMUST00000225824 1634 ntBASIC20.78■□□□□ 0.92
Fen1P39749 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Fen1P39749 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Fen1P39749 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Fen1P39749 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Fen1P39749 Gm9806-201ENSMUST00000051080 552 ntBASIC20.77■□□□□ 0.92
Fen1P39749 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Fen1P39749 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Fen1P39749 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Fen1P39749 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fen1P39749 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Fen1P39749 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fen1P39749 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fen1P39749 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Fen1P39749 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fen1P39749 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Fen1P39749 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fen1P39749 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fen1P39749 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fen1P39749 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Fen1P39749 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Fen1P39749 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Fen1P39749 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Fen1P39749 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Fen1P39749 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Fen1P39749 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Fen1P39749 Iqck-206ENSMUST00000208658 2891 ntBASIC20.75■□□□□ 0.91
Fen1P39749 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fen1P39749 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fen1P39749 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Fen1P39749 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fen1P39749 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.74■□□□□ 0.91
Fen1P39749 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms