Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc6a13P31649 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Slc6a13P31649 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc6a13P31649 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Slc6a13P31649 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.31■■□□□ 1
Slc6a13P31649 Gm15546-201ENSMUST00000122095 826 ntBASIC21.31■■□□□ 1
Slc6a13P31649 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Slc6a13P31649 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.31■■□□□ 1
Slc6a13P31649 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc6a13P31649 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc6a13P31649 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.31■■□□□ 1
Slc6a13P31649 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Slc6a13P31649 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc6a13P31649 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc6a13P31649 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.31■■□□□ 1
Slc6a13P31649 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc6a13P31649 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc6a13P31649 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
Slc6a13P31649 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.3■■□□□ 1
Slc6a13P31649 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Slc6a13P31649 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc6a13P31649 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.29■■□□□ 1
Slc6a13P31649 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.29■■□□□ 1
Slc6a13P31649 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Slc6a13P31649 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Slc6a13P31649 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Slc6a13P31649 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc6a13P31649 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc6a13P31649 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.28■■□□□ 1
Slc6a13P31649 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.28■■□□□ 1
Slc6a13P31649 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Slc6a13P31649 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc6a13P31649 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc6a13P31649 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
Slc6a13P31649 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
Slc6a13P31649 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.27■■□□□ 1
Slc6a13P31649 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Slc6a13P31649 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a13P31649 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a13P31649 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a13P31649 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a13P31649 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a13P31649 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.26■□□□□ 0.99
Slc6a13P31649 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a13P31649 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.26■□□□□ 0.99
Slc6a13P31649 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc6a13P31649 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a13P31649 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Slc6a13P31649 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a13P31649 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a13P31649 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a13P31649 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc6a13P31649 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a13P31649 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a13P31649 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a13P31649 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.24■□□□□ 0.99
Slc6a13P31649 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a13P31649 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a13P31649 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc6a13P31649 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a13P31649 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.23■□□□□ 0.99
Slc6a13P31649 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a13P31649 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a13P31649 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a13P31649 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a13P31649 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a13P31649 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a13P31649 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc6a13P31649 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a13P31649 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slc6a13P31649 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a13P31649 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a13P31649 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a13P31649 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a13P31649 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a13P31649 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Slc6a13P31649 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a13P31649 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.21■□□□□ 0.99
Slc6a13P31649 Gm10399-202ENSMUST00000202768 748 ntBASIC21.21■□□□□ 0.99
Slc6a13P31649 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a13P31649 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a13P31649 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a13P31649 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a13P31649 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a13P31649 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a13P31649 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.2■□□□□ 0.98
Slc6a13P31649 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.2■□□□□ 0.98
Slc6a13P31649 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Slc6a13P31649 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Slc6a13P31649 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a13P31649 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a13P31649 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a13P31649 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Slc6a13P31649 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a13P31649 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.19■□□□□ 0.98
Slc6a13P31649 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a13P31649 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a13P31649 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.19■□□□□ 0.98
Slc6a13P31649 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a13P31649 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms