Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SLC6A4P31645 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SLC6A4P31645 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.99■■□□□ 1.43
SLC6A4P31645 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
SLC6A4P31645 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
SLC6A4P31645 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SLC6A4P31645 AC020928.2-201ENST00000588717 2197 ntBASIC23.98■■□□□ 1.43
SLC6A4P31645 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
SLC6A4P31645 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SLC6A4P31645 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.98■■□□□ 1.43
SLC6A4P31645 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
SLC6A4P31645 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.98■■□□□ 1.43
SLC6A4P31645 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.98■■□□□ 1.43
SLC6A4P31645 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
SLC6A4P31645 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SLC6A4P31645 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.97■■□□□ 1.43
SLC6A4P31645 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SLC6A4P31645 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
SLC6A4P31645 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.97■■□□□ 1.43
SLC6A4P31645 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.97■■□□□ 1.43
SLC6A4P31645 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SLC6A4P31645 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.96■■□□□ 1.43
SLC6A4P31645 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SLC6A4P31645 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.96■■□□□ 1.43
SLC6A4P31645 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SLC6A4P31645 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.96■■□□□ 1.43
SLC6A4P31645 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.96■■□□□ 1.43
SLC6A4P31645 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.96■■□□□ 1.43
SLC6A4P31645 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.96■■□□□ 1.43
SLC6A4P31645 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.96■■□□□ 1.43
SLC6A4P31645 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.96■■□□□ 1.43
SLC6A4P31645 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.96■■□□□ 1.43
SLC6A4P31645 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SLC6A4P31645 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.95■■□□□ 1.43
SLC6A4P31645 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.95■■□□□ 1.43
SLC6A4P31645 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SLC6A4P31645 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
SLC6A4P31645 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SLC6A4P31645 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.95■■□□□ 1.42
SLC6A4P31645 KRT16P3-201ENST00000439127 1283 ntBASIC23.95■■□□□ 1.42
SLC6A4P31645 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
SLC6A4P31645 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.95■■□□□ 1.42
SLC6A4P31645 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.95■■□□□ 1.42
SLC6A4P31645 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.95■■□□□ 1.42
SLC6A4P31645 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SLC6A4P31645 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
SLC6A4P31645 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SLC6A4P31645 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.94■■□□□ 1.42
SLC6A4P31645 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SLC6A4P31645 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SLC6A4P31645 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SLC6A4P31645 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SLC6A4P31645 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
SLC6A4P31645 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
SLC6A4P31645 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
SLC6A4P31645 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SLC6A4P31645 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SLC6A4P31645 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.93■■□□□ 1.42
SLC6A4P31645 SNX5-217ENST00000606557 1087 ntBASIC23.93■■□□□ 1.42
SLC6A4P31645 AC131212.1-201ENST00000613771 668 ntBASIC23.93■■□□□ 1.42
SLC6A4P31645 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.93■■□□□ 1.42
SLC6A4P31645 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SLC6A4P31645 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SLC6A4P31645 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SLC6A4P31645 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SLC6A4P31645 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.92■■□□□ 1.42
SLC6A4P31645 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.92■■□□□ 1.42
SLC6A4P31645 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SLC6A4P31645 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SLC6A4P31645 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.92■■□□□ 1.42
SLC6A4P31645 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SLC6A4P31645 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SLC6A4P31645 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SLC6A4P31645 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SLC6A4P31645 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SLC6A4P31645 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.91■■□□□ 1.42
SLC6A4P31645 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.91■■□□□ 1.42
SLC6A4P31645 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SLC6A4P31645 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.9■■□□□ 1.42
SLC6A4P31645 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SLC6A4P31645 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SLC6A4P31645 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.9■■□□□ 1.42
SLC6A4P31645 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.9■■□□□ 1.42
SLC6A4P31645 MTDHP2-201ENST00000601468 714 ntBASIC23.9■■□□□ 1.42
SLC6A4P31645 AC010997.5-201ENST00000609182 354 ntBASIC23.9■■□□□ 1.42
SLC6A4P31645 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.9■■□□□ 1.42
SLC6A4P31645 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SLC6A4P31645 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
SLC6A4P31645 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SLC6A4P31645 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.9■■□□□ 1.42
SLC6A4P31645 AC138932.3-201ENST00000567634 1902 ntBASIC23.9■■□□□ 1.42
SLC6A4P31645 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SLC6A4P31645 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.89■■□□□ 1.42
SLC6A4P31645 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SLC6A4P31645 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.89■■□□□ 1.42
SLC6A4P31645 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SLC6A4P31645 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SLC6A4P31645 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
SLC6A4P31645 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SLC6A4P31645 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 224.6 ms