Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd40lgP27548 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.13■□□□□ 0.65
Cd40lgP27548 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd40lgP27548 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cd40lgP27548 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Cd40lgP27548 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Cd40lgP27548 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cd40lgP27548 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cd40lgP27548 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cd40lgP27548 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cd40lgP27548 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cd40lgP27548 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cd40lgP27548 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cd40lgP27548 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cd40lgP27548 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cd40lgP27548 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.11■□□□□ 0.65
Cd40lgP27548 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cd40lgP27548 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.11■□□□□ 0.65
Cd40lgP27548 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.11■□□□□ 0.65
Cd40lgP27548 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cd40lgP27548 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cd40lgP27548 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cd40lgP27548 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cd40lgP27548 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cd40lgP27548 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cd40lgP27548 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Cd40lgP27548 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.1■□□□□ 0.65
Cd40lgP27548 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cd40lgP27548 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cd40lgP27548 Rps24-207ENSMUST00000224568 714 ntBASIC19.1■□□□□ 0.65
Cd40lgP27548 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.1■□□□□ 0.65
Cd40lgP27548 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cd40lgP27548 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cd40lgP27548 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cd40lgP27548 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cd40lgP27548 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cd40lgP27548 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cd40lgP27548 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cd40lgP27548 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cd40lgP27548 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cd40lgP27548 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cd40lgP27548 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.09■□□□□ 0.65
Cd40lgP27548 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cd40lgP27548 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cd40lgP27548 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cd40lgP27548 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cd40lgP27548 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cd40lgP27548 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Cd40lgP27548 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cd40lgP27548 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cd40lgP27548 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cd40lgP27548 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cd40lgP27548 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.07■□□□□ 0.64
Cd40lgP27548 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cd40lgP27548 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cd40lgP27548 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cd40lgP27548 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cd40lgP27548 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cd40lgP27548 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cd40lgP27548 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cd40lgP27548 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cd40lgP27548 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Cd40lgP27548 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd40lgP27548 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd40lgP27548 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cd40lgP27548 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cd40lgP27548 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd40lgP27548 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd40lgP27548 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.05■□□□□ 0.64
Cd40lgP27548 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.05■□□□□ 0.64
Cd40lgP27548 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd40lgP27548 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd40lgP27548 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd40lgP27548 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd40lgP27548 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.05■□□□□ 0.64
Cd40lgP27548 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.05■□□□□ 0.64
Cd40lgP27548 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd40lgP27548 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cd40lgP27548 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Cd40lgP27548 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cd40lgP27548 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.04■□□□□ 0.64
Cd40lgP27548 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cd40lgP27548 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cd40lgP27548 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cd40lgP27548 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.03■□□□□ 0.64
Cd40lgP27548 Etf1-202ENSMUST00000180351 108 ntBASIC19.03■□□□□ 0.64
Cd40lgP27548 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.03■□□□□ 0.64
Cd40lgP27548 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.03■□□□□ 0.64
Cd40lgP27548 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cd40lgP27548 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cd40lgP27548 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cd40lgP27548 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cd40lgP27548 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cd40lgP27548 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.02■□□□□ 0.64
Cd40lgP27548 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cd40lgP27548 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Cd40lgP27548 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cd40lgP27548 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.02■□□□□ 0.64
Cd40lgP27548 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.02■□□□□ 0.64
Cd40lgP27548 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms