Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
LINGO3P0C6S8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.3■■□□□ 1.16
LINGO3P0C6S8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.3■■□□□ 1.16
LINGO3P0C6S8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.29■■□□□ 1.16
LINGO3P0C6S8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
LINGO3P0C6S8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LINGO3P0C6S8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LINGO3P0C6S8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.29■■□□□ 1.16
LINGO3P0C6S8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
LINGO3P0C6S8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
LINGO3P0C6S8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
LINGO3P0C6S8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.29■■□□□ 1.16
LINGO3P0C6S8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LINGO3P0C6S8 ECEL1P2-201ENST00000461596 1295 ntBASIC22.29■■□□□ 1.16
LINGO3P0C6S8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.29■■□□□ 1.16
LINGO3P0C6S8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LINGO3P0C6S8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
LINGO3P0C6S8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
LINGO3P0C6S8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LINGO3P0C6S8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LINGO3P0C6S8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LINGO3P0C6S8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LINGO3P0C6S8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.29■■□□□ 1.16
LINGO3P0C6S8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LINGO3P0C6S8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LINGO3P0C6S8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LINGO3P0C6S8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LINGO3P0C6S8 HSD17B1P1-201ENST00000590052 955 ntBASIC22.28■■□□□ 1.16
LINGO3P0C6S8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.28■■□□□ 1.16
LINGO3P0C6S8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LINGO3P0C6S8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LINGO3P0C6S8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.28■■□□□ 1.16
LINGO3P0C6S8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LINGO3P0C6S8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.27■■□□□ 1.16
LINGO3P0C6S8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LINGO3P0C6S8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LINGO3P0C6S8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LINGO3P0C6S8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LINGO3P0C6S8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.27■■□□□ 1.16
LINGO3P0C6S8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LINGO3P0C6S8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.26■■□□□ 1.15
LINGO3P0C6S8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
LINGO3P0C6S8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LINGO3P0C6S8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.26■■□□□ 1.15
LINGO3P0C6S8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LINGO3P0C6S8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINGO3P0C6S8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINGO3P0C6S8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINGO3P0C6S8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.25■■□□□ 1.15
LINGO3P0C6S8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINGO3P0C6S8 AC025884.2-201ENST00000553429 711 ntBASIC22.25■■□□□ 1.15
LINGO3P0C6S8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.25■■□□□ 1.15
LINGO3P0C6S8 RNF126P1-201ENST00000567452 1320 ntBASIC22.25■■□□□ 1.15
LINGO3P0C6S8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
LINGO3P0C6S8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.24■■□□□ 1.15
LINGO3P0C6S8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
LINGO3P0C6S8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
LINGO3P0C6S8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
LINGO3P0C6S8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LINGO3P0C6S8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LINGO3P0C6S8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LINGO3P0C6S8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LINGO3P0C6S8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.23■■□□□ 1.15
LINGO3P0C6S8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.23■■□□□ 1.15
LINGO3P0C6S8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LINGO3P0C6S8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LINGO3P0C6S8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
LINGO3P0C6S8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LINGO3P0C6S8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LINGO3P0C6S8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
LINGO3P0C6S8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LINGO3P0C6S8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.23■■□□□ 1.15
LINGO3P0C6S8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.23■■□□□ 1.15
LINGO3P0C6S8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
LINGO3P0C6S8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
LINGO3P0C6S8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
LINGO3P0C6S8 SMPD5-203ENST00000639008 1464 ntBASIC22.22■■□□□ 1.15
LINGO3P0C6S8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LINGO3P0C6S8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LINGO3P0C6S8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LINGO3P0C6S8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LINGO3P0C6S8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.22■■□□□ 1.15
LINGO3P0C6S8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LINGO3P0C6S8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LINGO3P0C6S8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
LINGO3P0C6S8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.22■■□□□ 1.15
LINGO3P0C6S8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LINGO3P0C6S8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LINGO3P0C6S8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
LINGO3P0C6S8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LINGO3P0C6S8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LINGO3P0C6S8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LINGO3P0C6S8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.21■■□□□ 1.15
LINGO3P0C6S8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
LINGO3P0C6S8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
LINGO3P0C6S8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
LINGO3P0C6S8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LINGO3P0C6S8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
LINGO3P0C6S8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LINGO3P0C6S8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms