Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.26■□□□□ 0.67
Tuba1bP05213 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Tuba1bP05213 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tuba1bP05213 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Tuba1bP05213 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Tuba1bP05213 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Tuba1bP05213 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Tuba1bP05213 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tuba1bP05213 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tuba1bP05213 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tuba1bP05213 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tuba1bP05213 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.24■□□□□ 0.67
Tuba1bP05213 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tuba1bP05213 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tuba1bP05213 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tuba1bP05213 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tuba1bP05213 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.24■□□□□ 0.67
Tuba1bP05213 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tuba1bP05213 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tuba1bP05213 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tuba1bP05213 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tuba1bP05213 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tuba1bP05213 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tuba1bP05213 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tuba1bP05213 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Tuba1bP05213 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.24■□□□□ 0.67
Tuba1bP05213 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Tuba1bP05213 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tuba1bP05213 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tuba1bP05213 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Tuba1bP05213 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tuba1bP05213 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tuba1bP05213 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tuba1bP05213 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tuba1bP05213 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tuba1bP05213 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.22■□□□□ 0.67
Tuba1bP05213 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tuba1bP05213 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tuba1bP05213 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tuba1bP05213 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tuba1bP05213 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tuba1bP05213 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tuba1bP05213 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tuba1bP05213 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tuba1bP05213 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tuba1bP05213 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tuba1bP05213 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tuba1bP05213 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tuba1bP05213 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.21■□□□□ 0.67
Tuba1bP05213 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tuba1bP05213 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tuba1bP05213 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tuba1bP05213 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tuba1bP05213 Iqck-206ENSMUST00000208658 2891 ntBASIC19.2■□□□□ 0.66
Tuba1bP05213 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tuba1bP05213 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tuba1bP05213 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tuba1bP05213 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tuba1bP05213 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tuba1bP05213 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tuba1bP05213 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tuba1bP05213 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tuba1bP05213 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tuba1bP05213 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.19■□□□□ 0.66
Tuba1bP05213 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tuba1bP05213 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Tuba1bP05213 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tuba1bP05213 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.18■□□□□ 0.66
Tuba1bP05213 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tuba1bP05213 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tuba1bP05213 Gm10420-201ENSMUST00000121713 882 ntBASIC19.18■□□□□ 0.66
Tuba1bP05213 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tuba1bP05213 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tuba1bP05213 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tuba1bP05213 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tuba1bP05213 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tuba1bP05213 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.17■□□□□ 0.66
Tuba1bP05213 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tuba1bP05213 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tuba1bP05213 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tuba1bP05213 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tuba1bP05213 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tuba1bP05213 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Tuba1bP05213 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tuba1bP05213 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.16■□□□□ 0.66
Tuba1bP05213 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Tuba1bP05213 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tuba1bP05213 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Tuba1bP05213 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tuba1bP05213 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Tuba1bP05213 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tuba1bP05213 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tuba1bP05213 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tuba1bP05213 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tuba1bP05213 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tuba1bP05213 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Tuba1bP05213 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tuba1bP05213 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Tuba1bP05213 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tuba1bP05213 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms