Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cops3O88543 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cops3O88543 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cops3O88543 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cops3O88543 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cops3O88543 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cops3O88543 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.66■□□□□ 0.58
Cops3O88543 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cops3O88543 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cops3O88543 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.66■□□□□ 0.58
Cops3O88543 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cops3O88543 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cops3O88543 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cops3O88543 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.66■□□□□ 0.58
Cops3O88543 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cops3O88543 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cops3O88543 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cops3O88543 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cops3O88543 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.65■□□□□ 0.58
Cops3O88543 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cops3O88543 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cops3O88543 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
Cops3O88543 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cops3O88543 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.64■□□□□ 0.57
Cops3O88543 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops3O88543 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.64■□□□□ 0.57
Cops3O88543 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.64■□□□□ 0.57
Cops3O88543 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops3O88543 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops3O88543 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Cops3O88543 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops3O88543 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cops3O88543 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cops3O88543 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cops3O88543 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cops3O88543 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cops3O88543 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.63■□□□□ 0.57
Cops3O88543 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cops3O88543 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cops3O88543 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops3O88543 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops3O88543 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops3O88543 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops3O88543 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cops3O88543 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.61■□□□□ 0.57
Cops3O88543 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cops3O88543 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cops3O88543 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cops3O88543 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cops3O88543 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Cops3O88543 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cops3O88543 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cops3O88543 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cops3O88543 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cops3O88543 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cops3O88543 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cops3O88543 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cops3O88543 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cops3O88543 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cops3O88543 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Cops3O88543 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cops3O88543 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cops3O88543 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.59■□□□□ 0.57
Cops3O88543 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cops3O88543 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cops3O88543 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cops3O88543 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.58■□□□□ 0.56
Cops3O88543 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cops3O88543 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cops3O88543 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cops3O88543 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Cops3O88543 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cops3O88543 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cops3O88543 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cops3O88543 Gm11175-201ENSMUST00000116172 543 ntBASIC18.57■□□□□ 0.56
Cops3O88543 Gm14523-201ENSMUST00000117260 558 ntBASIC18.57■□□□□ 0.56
Cops3O88543 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.57■□□□□ 0.56
Cops3O88543 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.57■□□□□ 0.56
Cops3O88543 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Cops3O88543 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.57■□□□□ 0.56
Cops3O88543 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cops3O88543 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cops3O88543 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cops3O88543 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cops3O88543 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cops3O88543 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cops3O88543 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cops3O88543 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cops3O88543 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cops3O88543 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cops3O88543 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.55■□□□□ 0.56
Cops3O88543 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cops3O88543 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cops3O88543 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
Cops3O88543 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.54■□□□□ 0.56
Cops3O88543 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cops3O88543 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Cops3O88543 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cops3O88543 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cops3O88543 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms