Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Dnmt3aO88508 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Dnmt3aO88508 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.94■□□□□ 0.94
Dnmt3aO88508 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Dnmt3aO88508 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Dnmt3aO88508 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.93■□□□□ 0.94
Dnmt3aO88508 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Dnmt3aO88508 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Dnmt3aO88508 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Dnmt3aO88508 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.93■□□□□ 0.94
Dnmt3aO88508 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Dnmt3aO88508 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Dnmt3aO88508 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Dnmt3aO88508 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.92■□□□□ 0.94
Dnmt3aO88508 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Dnmt3aO88508 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Dnmt3aO88508 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.92■□□□□ 0.94
Dnmt3aO88508 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Dnmt3aO88508 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Dnmt3aO88508 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Dnmt3aO88508 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Dnmt3aO88508 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Dnmt3aO88508 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.92■□□□□ 0.94
Dnmt3aO88508 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Dnmt3aO88508 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.91■□□□□ 0.94
Dnmt3aO88508 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.91■□□□□ 0.94
Dnmt3aO88508 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Dnmt3aO88508 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.91■□□□□ 0.94
Dnmt3aO88508 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Dnmt3aO88508 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Dnmt3aO88508 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Dnmt3aO88508 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Dnmt3aO88508 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Dnmt3aO88508 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Dnmt3aO88508 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.9■□□□□ 0.94
Dnmt3aO88508 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.9■□□□□ 0.94
Dnmt3aO88508 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.9■□□□□ 0.94
Dnmt3aO88508 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.9■□□□□ 0.94
Dnmt3aO88508 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Dnmt3aO88508 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Dnmt3aO88508 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Dnmt3aO88508 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.89■□□□□ 0.93
Dnmt3aO88508 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Dnmt3aO88508 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Dnmt3aO88508 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Dnmt3aO88508 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Dnmt3aO88508 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Dnmt3aO88508 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Dnmt3aO88508 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.88■□□□□ 0.93
Dnmt3aO88508 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Dnmt3aO88508 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Dnmt3aO88508 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Dnmt3aO88508 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Dnmt3aO88508 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Dnmt3aO88508 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Dnmt3aO88508 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Dnmt3aO88508 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Dnmt3aO88508 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Dnmt3aO88508 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.87■□□□□ 0.93
Dnmt3aO88508 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Dnmt3aO88508 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Dnmt3aO88508 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Dnmt3aO88508 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Dnmt3aO88508 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Dnmt3aO88508 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Dnmt3aO88508 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Dnmt3aO88508 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Dnmt3aO88508 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Dnmt3aO88508 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Dnmt3aO88508 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Dnmt3aO88508 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Dnmt3aO88508 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Dnmt3aO88508 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Dnmt3aO88508 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.86■□□□□ 0.93
Dnmt3aO88508 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.86■□□□□ 0.93
Dnmt3aO88508 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Dnmt3aO88508 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Dnmt3aO88508 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Dnmt3aO88508 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Dnmt3aO88508 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Dnmt3aO88508 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Dnmt3aO88508 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Dnmt3aO88508 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Dnmt3aO88508 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Dnmt3aO88508 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Dnmt3aO88508 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Dnmt3aO88508 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Dnmt3aO88508 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Dnmt3aO88508 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
Dnmt3aO88508 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Dnmt3aO88508 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.84■□□□□ 0.93
Dnmt3aO88508 Gm10399-202ENSMUST00000202768 748 ntBASIC20.84■□□□□ 0.93
Dnmt3aO88508 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Dnmt3aO88508 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Dnmt3aO88508 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.83■□□□□ 0.93
Dnmt3aO88508 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Dnmt3aO88508 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Dnmt3aO88508 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Dnmt3aO88508 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.83■□□□□ 0.92
Dnmt3aO88508 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms