Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.39■□□□□ 0.85
Cdh16O88338 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh16O88338 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh16O88338 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh16O88338 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh16O88338 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh16O88338 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.38■□□□□ 0.85
Cdh16O88338 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cdh16O88338 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh16O88338 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cdh16O88338 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Cdh16O88338 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Cdh16O88338 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh16O88338 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh16O88338 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh16O88338 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh16O88338 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh16O88338 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh16O88338 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh16O88338 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Cdh16O88338 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh16O88338 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.36■□□□□ 0.85
Cdh16O88338 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh16O88338 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh16O88338 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Cdh16O88338 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh16O88338 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Cdh16O88338 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh16O88338 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh16O88338 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.35■□□□□ 0.85
Cdh16O88338 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh16O88338 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cdh16O88338 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.35■□□□□ 0.85
Cdh16O88338 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh16O88338 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh16O88338 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.35■□□□□ 0.85
Cdh16O88338 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh16O88338 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh16O88338 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh16O88338 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Cdh16O88338 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Cdh16O88338 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh16O88338 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh16O88338 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh16O88338 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Cdh16O88338 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.34■□□□□ 0.85
Cdh16O88338 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh16O88338 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.34■□□□□ 0.85
Cdh16O88338 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh16O88338 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh16O88338 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh16O88338 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh16O88338 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.33■□□□□ 0.85
Cdh16O88338 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh16O88338 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.33■□□□□ 0.84
Cdh16O88338 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cdh16O88338 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh16O88338 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.32■□□□□ 0.84
Cdh16O88338 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh16O88338 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh16O88338 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh16O88338 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.32■□□□□ 0.84
Cdh16O88338 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh16O88338 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh16O88338 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh16O88338 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Cdh16O88338 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh16O88338 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh16O88338 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh16O88338 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh16O88338 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh16O88338 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh16O88338 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh16O88338 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh16O88338 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cdh16O88338 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh16O88338 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh16O88338 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh16O88338 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cdh16O88338 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh16O88338 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh16O88338 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh16O88338 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.3■□□□□ 0.84
Cdh16O88338 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.3■□□□□ 0.84
Cdh16O88338 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Cdh16O88338 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh16O88338 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.3■□□□□ 0.84
Cdh16O88338 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh16O88338 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh16O88338 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.29■□□□□ 0.84
Cdh16O88338 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cdh16O88338 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh16O88338 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.29■□□□□ 0.84
Cdh16O88338 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh16O88338 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.28■□□□□ 0.84
Cdh16O88338 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh16O88338 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh16O88338 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.28■□□□□ 0.84
Cdh16O88338 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh16O88338 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms